Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte3g01960 ATGTCGATTTTTGAGTACAATGGGAGTGCCCTAGTAGCCATGGTCGGCAAGAATTGCTTCGCCATAGGGAGCGATCGGAGGTTTGGGGTTCAGCTTCAGACCATAGCCACTGATTTTCAGAGGATCTACAAAATTCACGACAAGCTTTTCATCGGTCTCGCTGGTCTCGGAACTGATACCCAGACCTTGTACCAGAGGCTTGTGTTTCGTCACAAACTCTATCAGCTTCGTGAAGAGAGAGATATGAAGCCCGAGACTTTCGCTAGCCTCGTGTCTGCTATTCTCTATGAGAAAAGGTTTGGTCCATATCTTTGCCAGCCCGTAATTGCTGGACTAGGAGATGAAGACAAGCCTTTTATATGCACCATGGATTCTCTTGGGGCCAAGGAGCTCGCAAAGGACTTTGTTGTTGCTGGAACTGCGTCAGAGTCTCTTTATGGTGCTTGTGAGTCGATGTATAAGCCTGACATGGAAGCAGAGGAATTATTTGAGACCATTTCTCAAGCCTTGCTGTCATCAGTTGACCGAGACTGTCTGAGTGGCTGGGGAGGACACGTTTATGTTGTCACGCCAACTGAAGTAAAAGAAAGAATCTTGAAGGGAAGAATGGATTGA 615 0.4699 MSIFEYNGSALVAMVGKNCFAIGSDRRFGVQLQTIATDFQRIYKIHDKLFIGLAGLGTDTQTLYQRLVFRHKLYQLREERDMKPETFASLVSAILYEKRFGPYLCQPVIAGLGDEDKPFICTMDSLGAKELAKDFVVAGTASESLYGACESMYKPDMEAEELFETISQALLSSVDRDCLSGWGGHVYVVTPTEVKERILKGRMD* 205
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte3g01960 204 Gene3D Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 1 204 IPR029055 -
Pte3g01960 204 CDD proteasome_beta_type_3 6 200 IPR033811 GO:0019774|GO:0043161
Pte3g01960 204 Pfam Proteasome subunit 7 189 IPR001353 GO:0005839|GO:0051603
Pte3g01960 204 SUPERFAMILY N-terminal nucleophile aminohydrolases (Ntn hydrolases) 4 204 IPR029055 -
Pte3g01960 204 PANTHER METALLOPROTEASE TLDD 4 197 IPR023333 -
Pte3g01960 204 ProSitePatterns Proteasome beta-type subunits signature. 12 59 IPR016050 GO:0005839|GO:0051603
Pte3g01960 204 ProSiteProfiles Proteasome beta-type subunit profile. 8 189 IPR023333 -
Pte3g01960 204 FunFam Proteasome subunit beta 1 204 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte3g01960 Pte-Chr3 31365989 31369173 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte3g01960 K02735 - qsa:O6P43_015153 393.275
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte3g01960 3 31365989 31369173 Pte3g01960 3 31365989 31369173 RCT