Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte3g01959 ATGGAGAAAGCTTCGCAGTTGCAGAGGTGGGGGTGTTCATGCTGCCTTGCATTGTTTATGCTCGCTATTGGTTTTGCTCGTGGAGATGTAACCTATGATGGGAGATCCTTGATCATCCATGGCGACCATAGAATCCTCTTCTCTGGTTCAATTCATTATCCTCGTAGCACACCTCAGATGTGGCCATCTCTCATTGCTAAAGCCAAGGAAGGAGGATTAGATGTGATACAAACTTATGTGTTTTGGAACATTCATGAACCTCACCAGGGACAGTATTACTTCAATGGAAGACGTAACTTAGTGCGGTTCATTAAGACAGTCCAAGCACACGGCCTATACGTCTGCCTCCGGATTGGACCTTTCATTGAGAGTGAATGGAGTTATGGGGGTCTACCATTTTGGTTGCATGATATTCCAGGCATCGTGTTTAGGTCTGATAATGAACCATTCAAGTTCTACATGCAAAACTTTACGACCAAAATAGTAAGCATGATGAAATCAGAAAATCTGTTTGCTTCTCAAGGAGGGCCTATCATATTGTCACAGATTGAGAATGAGTACTCTCTAGTAGAACGAGCTTTTAGAGACAAAGGACCGTCTTACGTTCGCTGGGCTGCACAAATGGCTGTCGGGCTTCAAGCTGGAGTGCCTTGGATAATGTGCAGGCAAGATGATGCTCCTGATCCGGTGATAAATACCTGTAATGGTATGCATTGTGGAGATGGATGGTCAGGACCTAATTCACCAAATAAACCTTCATTGTGGACAGAGAACTGGACCAGTTTTTATCAAGTCTACGGTGACGAGAGGTACCTTAGGTCAGCTCAAGATATTGCATTCAACGTTGCACTTTTCATAGCCAAGAATGGAAGCTATGTCAATTACTATATGTATCATGGAGGAACAAATTTTGGAAGGTCAGCCTCTGCTTTTGCCATAACAAGTTACTATGACGAAGCTCCGATCGATGAGTATGGTTTAATTAGGCAACCGAAATGGGGTCATCTCAAGGAACTGCATGCTGCAGTCAAGTTATGCACAGAGCCTTTACTTTCAGGAACCCAGAAGACATTCCCCTTGGGCCAACAACAAGAAGCCTATGTATTTAGTGGAAACACTGGAAAATGTGCTGCCTTTCTAGTGAACAAGAATGACAGCGCTGTTTCAGTTATCTTCCGGAACACTCGATATGAATTGCTTGGAAAATCTATAAGCATCCTCCCGGATTGTAAGACTGCCGTCTTTAACACAGCTAAGGTAAATGCACCACAGAGTACCAGATCAATGACACCAAGAATCAACTTTAATTCAAATGCAAAATGGGAAATCTATAAGGAACCTATCCCTAAATTTGGTGACACTAAAACAAGAAAACAGACACTGCTAGAGCATATGAACACGACGAAAGATGTATCGGACTATCTCTGGTACACCTTCAGGTGCCAGCTAAATTCCCCAGCTACTCGATCTGTTCTAAGCGTACTGTCATATGGACATGTTTTGCAAGTATTCGTTAATGGAGCACTTGCAGGCAAGCAAAACTCTTACAAGAATCCACGTTTCACCTGGGAGAATTCCGTAACTTTGGTCAATGGTGCAAACAACATTTCATTGCTCAGTGCAATAGTGGGGCTTCCGGATGGAGGAGCATATTTGGAGCGCAAGGTTGCTGGATTGCGGAGGGTGATGCTTCAAGGGAAAGACTTCACAAACTATTCATGGGGATATCAGGTGGGATTATGGGGAGAAAAATTGAGAGTCTACACGACTTCTGTATCTACCAAGGTTCACTGGAAACAGTTTAAAAGCTCTCAGCCACTCACATGGTATAAGACTCTGTTTGATGCTCCACTGGGAAATCAACCCGTTGCATTAAACCTTAATAGCATGGGTAAGGGTCAAGCTTGGGTCAATGGACAAAGCATAGGCAGATACTGGGTTTCTTTTCACACGTCAAATGGAACTCCTTCACAGACATGGTACAATGTACCCCGGTCCTTCCTCAAGCCCACAGGAAACCTGTTAGTTCTACTGGAAGAAGAAAGTGGAAATCCACTTGGAATTTCTCTGGATACAGTTTCATCAAGATGA 2091 0.4352 MEKASQLQRWGCSCCLALFMLAIGFARGDVTYDGRSLIIHGDHRILFSGSIHYPRSTPQMWPSLIAKAKEGGLDVIQTYVFWNIHEPHQGQYYFNGRRNLVRFIKTVQAHGLYVCLRIGPFIESEWSYGGLPFWLHDIPGIVFRSDNEPFKFYMQNFTTKIVSMMKSENLFASQGGPIILSQIENEYSLVERAFRDKGPSYVRWAAQMAVGLQAGVPWIMCRQDDAPDPVINTCNGMHCGDGWSGPNSPNKPSLWTENWTSFYQVYGDERYLRSAQDIAFNVALFIAKNGSYVNYYMYHGGTNFGRSASAFAITSYYDEAPIDEYGLIRQPKWGHLKELHAAVKLCTEPLLSGTQKTFPLGQQQEAYVFSGNTGKCAAFLVNKNDSAVSVIFRNTRYELLGKSISILPDCKTAVFNTAKVNAPQSTRSMTPRINFNSNAKWEIYKEPIPKFGDTKTRKQTLLEHMNTTKDVSDYLWYTFRCQLNSPATRSVLSVLSYGHVLQVFVNGALAGKQNSYKNPRFTWENSVTLVNGANNISLLSAIVGLPDGGAYLERKVAGLRRVMLQGKDFTNYSWGYQVGLWGEKLRVYTTSVSTKVHWKQFKSSQPLTWYKTLFDAPLGNQPVALNLNSMGKGQAWVNGQSIGRYWVSFHTSNGTPSQTWYNVPRSFLKPTGNLLVLLEEESGNPLGISLDTVSSR* 697
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte3g01959 696 PRINTS Glycosyl hydrolase family 35 signature 310 326 IPR001944 GO:0004553|GO:0005975
Pte3g01959 696 PRINTS Glycosyl hydrolase family 35 signature 254 269 IPR001944 GO:0004553|GO:0005975
Pte3g01959 696 PRINTS Glycosyl hydrolase family 35 signature 40 57 IPR001944 GO:0004553|GO:0005975
Pte3g01959 696 PRINTS Glycosyl hydrolase family 35 signature 116 135 IPR001944 GO:0004553|GO:0005975
Pte3g01959 696 PRINTS Glycosyl hydrolase family 35 signature 173 188 IPR001944 GO:0004553|GO:0005975
Pte3g01959 696 PRINTS Glycosyl hydrolase family 35 signature 61 79 IPR001944 GO:0004553|GO:0005975
Pte3g01959 696 PRINTS Glycosyl hydrolase family 35 signature 291 306 IPR001944 GO:0004553|GO:0005975
Pte3g01959 696 PRINTS Glycosyl hydrolase family 35 signature 632 648 IPR001944 GO:0004553|GO:0005975
Pte3g01959 696 PRINTS Glycosyl hydrolase family 35 signature 605 619 IPR001944 GO:0004553|GO:0005975
Pte3g01959 696 FunFam Beta-galactosidase 26 346 - -
Pte3g01959 696 Gene3D Glycosidases 27 347 - -
Pte3g01959 696 Gene3D - 552 695 - -
Pte3g01959 696 FunFam Beta-galactosidase 576 696 - -
Pte3g01959 696 Pfam Beta-sandwich domain in beta galactosidase 350 420 IPR041392 -
Pte3g01959 696 Pfam Glycosyl hydrolases family 35 36 342 IPR031330 -
Pte3g01959 696 SUPERFAMILY Galactose-binding domain-like 404 561 IPR008979 -
Pte3g01959 696 SUPERFAMILY (Trans)glycosidases 30 346 IPR017853 -
Pte3g01959 696 ProSitePatterns Glycosyl hydrolases family 35 putative active site. 175 187 IPR019801 GO:0004553|GO:0005975
Pte3g01959 696 FunFam Beta-galactosidase 296 422 - -
Pte3g01959 696 SUPERFAMILY Galactose-binding domain-like 573 693 IPR008979 -
Pte3g01959 696 PANTHER BETA-GALACTOSIDASE RELATED 21 694 IPR001944 GO:0004553|GO:0005975
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte3g01959 Pte-Chr3 31356759 31362674 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte3g01959 26 694 Glycoside Hydrolase AT5G63800 61.119 0.0 877
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte3g01959 - - qsa:O6P43_015151 1073.92
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte3g01959 3 31356759 31362674 Pte3g01959 3 31356759 31362674 RCT