Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte3g01955 ATGAAGATGGGTCAGAACACTGCTACCAAGAACCAGCTTCCTCACCATCATCAAGCGTTTGATGTTGTCTCCGTAGACGTTGTTTCTCAAGGTGGTTCGAAGTGCTTTGATGATGATGGCCGTCTCAGAAGAGCTGGCACTGTCTGGACTGCAAGTGCTCATATCATCACGGCTGTGATCGGTTCTGGTGTTCTGTCATTGGCCTGGGCTGTAGCTCAGCTTGGATGGATAGCTGGTCCGACTGCGATGTTCTTGTTCTCATTCGTAACTTACTACACCTCCACTCTACTCTCTGCCTGCTATCGCTCTGGCGACTCTGTCACTGGCAAGAGAAACTACACTTACATGGATGCCATTCAAGCCAACCTTGGTGGATTTAAGGTAAAACTCTGTGGTCTAGTTCAGTATCTGAATCTTTTTGGAGTTGCCATTGGCTATACGATTGCTTCATCAATAAGCATGATGGCAATCAAAAGGTCTAACTGTTTTCACAAGAGTGATGGGAAAGATCCATGCCATATGAACAGCAATATTTACATGATTTCATTTGGCATCGCCGAAATCATCTTCTCTCAAATACCCAACTTTGATCAATTGTGGTGGCTCTCCATTGTAGCTGCTGTCATGTCCTTTACTTACTCCATAATTGGGCTTGGTCTGGGAATTGCTAAAGTCGCGGAAAATGGAAAAATTGGAGGAAGCCTCACAGGAATAAGCATTGGTACTGTCACAGAGACACAAAAGATGTGGAGGAGCTTCCAAGCACTGGGTGATATAGCTTTTGCCTATTCTTACTCTCTCATCCTCATTGAAATTCAGGACACTATCAAATCTCCTCCATCAGAAGCCAAGACAATGAAGAAAGCCACATTCATCAGTGTTGCAGTCACAACTTTATTCTACATGTTGTGTGGCTGTGCTGGTTATGCTGCTTTTGGCGACTTATCTCCTGGAAACCTCCTGACTGGTTTTGGCTTTTACAACCCATATTGGCTCCTTGACATAGCTAATGCTGCCATAGTTATACACCTTGTTGGTGCATACCAAGTTTACTGCCAACCCCTTTTCGCTTTCATTGAGAAAGCAGCAGCAAAAAGGTACCCTGATAGTGACTTCATCGTAAAAGACATTGAAATCTCAATCCCAGGTCTCTCTCCCTACAAACTCAACCTCTTTCGATTAGTATGGCGAACCATTTTTGTAATCCTAACAACTCTCATATCCATGTTACTTCCATTCTTTAACGATGTTGTTGGACTTCTCGGTGCTTTTGGATTTTGGCCTCTCACTGTTTACTTCCCAGTGGAGATGTACATTGTGCAAAAGAAAATATCGAAGTGGAGCACCAAATGGATATGCCTCCAAATCCTTAGCATTGCTTGTCTTATGATTACCGTAGCAGCTGCAGCTGGCTCCATTGCTGGAATTATTTCTGACCTCCAATCTTACAAACCCTTCAAGAGCATTTATTAG 1473 0.4358 MKMGQNTATKNQLPHHHQAFDVVSVDVVSQGGSKCFDDDGRLRRAGTVWTASAHIITAVIGSGVLSLAWAVAQLGWIAGPTAMFLFSFVTYYTSTLLSACYRSGDSVTGKRNYTYMDAIQANLGGFKVKLCGLVQYLNLFGVAIGYTIASSISMMAIKRSNCFHKSDGKDPCHMNSNIYMISFGIAEIIFSQIPNFDQLWWLSIVAAVMSFTYSIIGLGLGIAKVAENGKIGGSLTGISIGTVTETQKMWRSFQALGDIAFAYSYSLILIEIQDTIKSPPSEAKTMKKATFISVAVTTLFYMLCGCAGYAAFGDLSPGNLLTGFGFYNPYWLLDIANAAIVIHLVGAYQVYCQPLFAFIEKAAAKRYPDSDFIVKDIEISIPGLSPYKLNLFRLVWRTIFVILTTLISMLLPFFNDVVGLLGAFGFWPLTVYFPVEMYIVQKKISKWSTKWICLQILSIACLMITVAAAAGSIAGIISDLQSYKPFKSIY* 491
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte3g01955 490 Pfam Transmembrane amino acid transporter protein 46 477 IPR013057 -
Pte3g01955 490 PANTHER OS05G0424000 PROTEIN-RELATED 48 473 - -
Pte3g01955 490 FunFam Amino acid permease 6 41 480 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte3g01955 Pte-Chr3 31305504 31308846 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte3g01955 15 491 Organic Solute Cotransporters AT1G77380 77.987 0.0 779
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte3g01955 K24917 - tcc:18592400 831.247
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte3g01955 3 31305504 31308846 Pte3g01955 3 31305504 31308846 RCT