Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte3g01944 ATGGCGAGGGTGTGCTGGCCATATTTTGATCCCGAGTATGAAAACTTCAGTACAAGGATGAATCCTCCCAGGGTTTCCGTGGATAACTCTAGCTGCAGTGATTGTACACTGATCAAGGTGGACAGTGTGAACAAACCTGGAATCCTGCTGGAAGTCGTGCAAATTCTTTCAGACCTTGATTTCATTATCACCAAAGCTTACATCTCTTCTGACGGCGGATGGTTCATGGATGTATTTCATGTCACGGATCAACAAGGGAAGAAGATAACGGACAGAAAAACCATTGGTTACATAGAACAGGCTCTAGGACCAAAGGGTCAGATAGTAGAAGGAGCAAAAGCTTCTCCTGGAAAACGGGTTGGCATACATTCTGTTGGCGATCATGTAGCCGTTGAACTGATAGGAAGAGACCGCCCGGGTCTATTGTCGGAGATCTCAGCTGTTCTTGCCAGCCTTCACTTCAATGTAGTTGCTGCTGAAGTATGGACACATAATAGAAGAATAGCATGTGTTCTATATGTCAATGATGATTCTACATCTCAAACTGTGGATAATCTATTTCGACTGTCTCTCATGGAAGAGCAGCTCAAGAACGTCCTACGTGCATGTGAGGATGATGAGAAGGTTGGTCACACCAGTTTGTCCATGGGCTTTACCCATATTGACAGGAGGCTTCACCAAATGCTTTTCGCTGATAGAGACTATGAATATACTGGAGTGATGTCTGATATTGATTACCCTCCCTCCTTTAGAACTAAGATCACCATAGAGCGTTGTGAGGAGAAAGGATACTCAGTAGTTAGTGTCAGCTGCAAAGACCGGGCAAAGCTGATGTTCGACATCGTTTGCACTCTCACTGACATGCAATATGTTGTCTTCCATGCTGCAATTTCATCGGATGGGCCTTATGCATCGCAGGAGTATTATATTCGTCATGTGGATGGATGCACACTTGATACTGAAGCAGAGAAAGAAAGGGTAATCAAATGTATTGAAGCTGCAATCCATAGAAGAGTAAGCGAGGGTGTAAGTCTTGAGCTGTGTGCTAAAGATAGGGTAGGTTTATTATCTGAAGTAACAAGGATCCTGCGGGAGAATGGATTGTCAGTTTCAAGAGCTGGAGTCTCGACTATTGGAGAGCAAGCATTGAATATTTTCTACGTGAGAGATCCATCTGGAAATGCAGTGGATCCGAGGACTATAGAAGCACTTCGTAAAGAGATAGGAAACTCAATCAAGTTCAATGTGAAGAAGGTTCCAGCAGCCACTTACACCAAAGCACCTGAAATTAGTGGATGGGCTAAAACAAGCTTCTTCTTTGGGAATTTGTTGGAAAAGTTCTTACCTTGA 1350 0.437 MARVCWPYFDPEYENFSTRMNPPRVSVDNSSCSDCTLIKVDSVNKPGILLEVVQILSDLDFIITKAYISSDGGWFMDVFHVTDQQGKKITDRKTIGYIEQALGPKGQIVEGAKASPGKRVGIHSVGDHVAVELIGRDRPGLLSEISAVLASLHFNVVAAEVWTHNRRIACVLYVNDDSTSQTVDNLFRLSLMEEQLKNVLRACEDDEKVGHTSLSMGFTHIDRRLHQMLFADRDYEYTGVMSDIDYPPSFRTKITIERCEEKGYSVVSVSCKDRAKLMFDIVCTLTDMQYVVFHAAISSDGPYASQEYYIRHVDGCTLDTEAEKERVIKCIEAAIHRRVSEGVSLELCAKDRVGLLSEVTRILRENGLSVSRAGVSTIGEQALNIFYVRDPSGNAVDPRTIEALRKEIGNSIKFNVKKVPAATYTKAPEISGWAKTSFFFGNLLEKFLP* 450
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte3g01944 449 Pfam ACT domain 37 85 IPR002912 -
Pte3g01944 449 Pfam ACT domain 131 189 IPR002912 -
Pte3g01944 449 Pfam ACT domain 344 408 IPR002912 -
Pte3g01944 449 SUPERFAMILY ACT-like 340 410 IPR045865 -
Pte3g01944 449 ProSiteProfiles ACT domain profile. 130 211 IPR002912 -
Pte3g01944 449 SUPERFAMILY ACT-like 125 199 IPR045865 -
Pte3g01944 449 Gene3D - 339 417 - -
Pte3g01944 449 SUPERFAMILY ACT-like 32 105 IPR045865 -
Pte3g01944 449 CDD ACT_ACR_3 264 338 - -
Pte3g01944 449 ProSiteProfiles ACT domain profile. 344 424 IPR002912 -
Pte3g01944 449 CDD ACT_ACR_1 35 106 - -
Pte3g01944 449 Gene3D - 128 204 - -
Pte3g01944 449 ProSiteProfiles ACT domain profile. 37 117 IPR002912 -
Pte3g01944 449 PANTHER ACT DOMAIN-CONTAINING PROTEIN ACR4-RELATED 10 417 IPR040217 -
Pte3g01944 449 CDD ACT_ACR_4 342 409 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte3g01944 Pte-Chr3 31162318 31169996 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte3g01944 - - zju:107423459 770.77
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte3g01944 3 31162318 31169996 Pte3g01944 3 31162318 31169996 RCT