Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte3g01943 ATGGTTGGTCAAGAGAAGTTGAAAACTGAAGACTTGAATTTCTGTTTTGGGAAGCTTATGATGGTTGCTGGAGGTAAAAGTGGTGGAGAGAAGATGGCAATCACCGATTGGAAAGACATACCTATGGAGCTTTTACTGCAAATCCTTTCTCTCGTGGATGATCAGACTGTGATTGTGGCCTCTGGGGTCTGTCGTGGGTGGAGATATGCTATTTGCGTGGGTCTCACCCGGTTGTCGCTCTCATGGTGCAGCAAAAATATGAATAACCTGGTGTTATTGCTTGCTCCTAAATTTATGAATTTGCAAACTCTGATTTTGCGCCAAGACATACCACAACTTGCGGACAATGCAGTAGAGGTCATTGCAAATCATTGTCACGACCTGCAGATCTTGGACCTTAGCAAAAGCTTCAAGCTTACTGATCTCTCACTCTATTTTTTAGCCCACGGTTGTCCTAATCTCTTAAAACTCAACATCAGTGGTTGTTCAGCATTCAGTGATACTGCTGTGGCATACCTGGTCACTTTCTGCAGAAAGTTGGAAGCTTTAAACCTTTGTGGATGTGTCAGAGCTGCGTCTGACACTGCATTGCAGGCAATTGGACGCTACTGCAACCAGTTACAGTGTTTAAATCTTGGATGGTGTGAAAATGTTGGTGATGATGGAGTGATGAGCTTAGCACACGGTTGCCCCAATCTCAGAACACTTGATTTATGTGGCTGTGTCCGTATAACAGATGATAGTGTGATTGCTCTGGCAAATGGGTGTCCACATTTGAGATCACTTGGCCTCTACTTCTGTCAGAATATCACAGACAGAGCAATGTATTCTCTGGCCCATAGTAAAGTGAACAACAAGATGTGGGGATCTGCAAAGGGCAGAAATGATGAGGACGGGTTGAGGACTCTGAATATCAGCCAGTGCACTGCACTTACTCCTTCTGCAGTTCAAGCAGTTTGTGACACATTCCCTGGTCTTCACACCTGCTCAGGAAGGCATTCCCTCATCATGAGTGGCTGTTTGAATTTGACTTCTGTGCACTGTGCCTGTGCCGTCCAGGCTTACCGTACGGCCAGCACTTTCCCTCACGCTGCTCACTGA 1101 0.4578 MVGQEKLKTEDLNFCFGKLMMVAGGKSGGEKMAITDWKDIPMELLLQILSLVDDQTVIVASGVCRGWRYAICVGLTRLSLSWCSKNMNNLVLLLAPKFMNLQTLILRQDIPQLADNAVEVIANHCHDLQILDLSKSFKLTDLSLYFLAHGCPNLLKLNISGCSAFSDTAVAYLVTFCRKLEALNLCGCVRAASDTALQAIGRYCNQLQCLNLGWCENVGDDGVMSLAHGCPNLRTLDLCGCVRITDDSVIALANGCPHLRSLGLYFCQNITDRAMYSLAHSKVNNKMWGSAKGRNDEDGLRTLNISQCTALTPSAVQAVCDTFPGLHTCSGRHSLIMSGCLNLTSVHCACAVQAYRTASTFPHAAH* 367
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte3g01943 366 SMART LRR_CC_2 204 229 IPR006553 -
Pte3g01943 366 SMART LRR_CC_2 297 322 IPR006553 -
Pte3g01943 366 SMART LRR_CC_2 256 281 IPR006553 -
Pte3g01943 366 SMART LRR_CC_2 151 176 IPR006553 -
Pte3g01943 366 SMART LRR_CC_2 72 97 IPR006553 -
Pte3g01943 366 SMART LRR_CC_2 177 203 IPR006553 -
Pte3g01943 366 SMART LRR_CC_2 125 150 IPR006553 -
Pte3g01943 366 SMART LRR_CC_2 230 255 IPR006553 -
Pte3g01943 366 Pfam Leucine Rich repeat 256 279 IPR001611 GO:0005515
Pte3g01943 366 Pfam Leucine Rich repeat 230 253 IPR001611 GO:0005515
Pte3g01943 366 Pfam Leucine Rich repeat 204 227 IPR001611 GO:0005515
Pte3g01943 366 Pfam F-box domain 37 72 IPR001810 GO:0005515
Pte3g01943 366 Gene3D Ribonuclease Inhibitor 190 354 IPR032675 -
Pte3g01943 366 Gene3D Ribonuclease Inhibitor 72 188 IPR032675 -
Pte3g01943 366 FunFam F-box protein SKP2B 72 290 - -
Pte3g01943 366 CDD F-box_AtSKP2-like 37 83 - -
Pte3g01943 366 Gene3D - 36 71 - -
Pte3g01943 366 PANTHER UNCHARACTERIZED 218 347 - -
Pte3g01943 366 SUPERFAMILY RNI-like 70 347 - -
Pte3g01943 366 SUPERFAMILY F-box domain 34 76 IPR036047 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte3g01943 Pte-Chr3 31153238 31157642 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte3g01943 K03875 - qsa:O6P43_015091 613.994
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte3g01943 3 31153238 31157642 Pte3g01943 3 31153238 31157642 RCT