Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte3g01933 ATGGACACATGCCACTACCTCGGTACACATAGTCTTGGATGCACCTCTCGTGGCCAACACCTAACAATTCACCATCGACAGCTCAGCCTTGGCCTCAAACCACCGAACTCCACTATCAGACTCCGATCAACAACACCGATCTCTGCGGGGGTCTCGCCACCAAAGCTGCATTCACTGACACTAGAGAAGAGAGAAGTTTTTAAGTCACTAGAGGAATGGGCTTCCCGATCCGTACTGCCATTCCTCAAACCAGTGGAAAAATGCTGGCAGCCCCAGGACTTTGTGCCGGACTCTACCCTGCCATTTAATGATTTCACCGACCAGGTGAAAGCTCTACGTGATCGTACTGCTGACCTTCCAGACGATTACTTAGTGGTGTTGGTGGGTGACATGATCACCGAGGAAGCCCTGCCTACGTACGAGACATGGGTCAACACGCACGATGGAGTGAAAGACGAGACGGGAGCGAGCTCATCCCCATGGGCGACGTGGACCCGAGCTTGGACCGCCGAGGAGAATAGGCACGGGGATCTTCTACGAACCTATCTGTATCTTTCAGGTCGTGTTGACATGACCATGATTGACAAAACTGTGCAGTATTTGATTGGAGCAGGCATGGACGTAGGCACAGAGAGCAACCCGTACATGGGGTATGTATACACATCATTTCAGGAACGAGCAACGTTCATATCGCATGGCAACACAGCTCGCTTGGCAAAAGAAGGTGGTGACGAAGTGTTGGCGCGCATTTGTGGTACCATTGCTTCGGACGAGAAACGACATGAGAATGCATACTCTCGGATCGTAGAGAAGCTGCTGGAAGTGGACACGAATGAGGCTATGCTGGCAATCGGTGAGATGATGCGCAAGAAGATCACGATGCCGGCTTACCTGATGTACGATGGTGAAGATCCAAAGCTGTTTGAGCATTTCTCTTCTGTGGCTCAGAGACTAGGGGTTTACACGGCCAACGATTATGCCGATATATTGGAGTTTTTTATTGGAAGGTGGAGGCTGGAGAAGCTGCAGAACCTTAATGAAGAAGGTCGACGTGCACAAGACTTTGTATGTCAGCTACCCGCAAGGATTAGGAAATTTAAGGAGCGTGGTGACGAGCGCGCCAAGAAGATGAAGCTTAATGGCGCTGCAAAGTTCAGCTGGATTTTCAACGAGGAAGTGGCATTGTAA 1188 0.5051 MDTCHYLGTHSLGCTSRGQHLTIHHRQLSLGLKPPNSTIRLRSTTPISAGVSPPKLHSLTLEKREVFKSLEEWASRSVLPFLKPVEKCWQPQDFVPDSTLPFNDFTDQVKALRDRTADLPDDYLVVLVGDMITEEALPTYETWVNTHDGVKDETGASSSPWATWTRAWTAEENRHGDLLRTYLYLSGRVDMTMIDKTVQYLIGAGMDVGTESNPYMGYVYTSFQERATFISHGNTARLAKEGGDEVLARICGTIASDEKRHENAYSRIVEKLLEVDTNEAMLAIGEMMRKKITMPAYLMYDGEDPKLFEHFSSVAQRLGVYTANDYADILEFFIGRWRLEKLQNLNEEGRRAQDFVCQLPARIRKFKERGDERAKKMKLNGAAKFSWIFNEEVAL* 396
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte3g01933 395 PANTHER ACYL- ACYL-CARRIER-PROTEIN DESATURASE-RELATED 55 393 IPR005067 GO:0006631|GO:0045300
Pte3g01933 395 SUPERFAMILY Ferritin-like 55 393 IPR009078 -
Pte3g01933 395 Gene3D Ribonucleotide Reductase, subunit A 51 395 IPR012348 GO:0016491
Pte3g01933 395 FunFam Stearoyl-[acyl-carrier-protein] 9-desaturase, chloroplastic 48 395 - -
Pte3g01933 395 CDD Acyl_ACP_Desat 62 369 IPR005067 GO:0006631|GO:0045300
Pte3g01933 395 Pfam Fatty acid desaturase 62 389 IPR005067 GO:0006631|GO:0045300
Pte3g01933 395 PIRSF Dlt9_acylACP_des 19 395 IPR005067 GO:0006631|GO:0045300
Pte3g01933 395 ProSitePatterns Fatty acid desaturases family 2 signature. 312 331 IPR005803 GO:0006633|GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte3g01933 Pte-Chr3 31019738 31021377 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte3g01933 32 396 Acyl Lipid Metabolism Gene Families AT1G43800 67.819 0.0 537
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte3g01933 K03921 - pop:7469201 585.104
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte3g01933 3 31019738 31021377 Pte3g01933 3 31019738 31021377 RCT