Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte3g01875 ATGGTGGTCGACACTGCTTACTATGATATTTTGGGTGTCAATGTTGATGCATCCGCTGCAGAAATAAAAAAGGCATATTATCTCAAGGCAAAGACAGTTCACCCAGATAAAAATCCTGGAAATCCGGCAGCTGCTGAGAATTTTCAGGTACTTGGTGAGGCTTATCAAGTTCTGGGTGATCCTGAGAAACGAGAAGCATATGATAAGCATGGAAAGGAAGGAGTGCCACAAGAATTTATGTTAGACCCTTCAGCAGTATTTGGGATGCTGTTTGGAAGTGACTACTTTGAAGAATACGTTGGACAACTTGCTATTGCTTCTATAGCATGCATTGAACTAGAAGAAGATACACAAGATCCTGAACTCCGTAAGCAAATAATTCAAGAAAAAATTAAGGCATTGCAGAAAGAAAGGGAACTAAAGCTTAGTGTAATCTTGAAAGATCGACTTCAGCAATTTGTTGACGGACGTATGGATGAGTTTGTAAATTGGGCAAATACTGAAGCACTGCGACTTTCTAAAGCAGCTTTTGGAGAAGCAATGTTACATACGATTGGATATATATACACAAGGAAAGCTGCAAGGGAACTGGGAAAGGGTAAGCGGTACATGAAGGTGCCCTTTCTAGCAGAGTGGGTACGAGACAAAGGACACATGATAAAGTCACAAGTGATGGCAGCTTCAGGTGCCGTGTCTTTGATTCAAATACAAGAAGACCTTAAAAAGTTAAACCAAGGAGAAAACAAAGAAGAGAACCTGGTCAAAGCTTTTGCAGATAAAAAGGATGCTATGCTTAATTCCCTCTGGCAAATTAATGTGGTTGATATCGAGTCAACTCTGTCGCGTGTTTGTCTAGCAGTTCTTAAAGACCCTACTGCCTCCAAGGATGTTTTGAGGTTACGGGCCAAAGCCTTGAAAAAGTTTGGGACCATTTTCCAGGGTGCCAAGGGACCTTACAATAGAGAGAACAGCCTACGCCTTGAAACTGACGAGATGGACAAATCTTCATCATAA 1014 0.4132 MVVDTAYYDILGVNVDASAAEIKKAYYLKAKTVHPDKNPGNPAAAENFQVLGEAYQVLGDPEKREAYDKHGKEGVPQEFMLDPSAVFGMLFGSDYFEEYVGQLAIASIACIELEEDTQDPELRKQIIQEKIKALQKERELKLSVILKDRLQQFVDGRMDEFVNWANTEALRLSKAAFGEAMLHTIGYIYTRKAARELGKGKRYMKVPFLAEWVRDKGHMIKSQVMAASGAVSLIQIQEDLKKLNQGENKEENLVKAFADKKDAMLNSLWQINVVDIESTLSRVCLAVLKDPTASKDVLRLRAKALKKFGTIFQGAKGPYNRENSLRLETDEMDKSSS* 338
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte3g01875 337 ProSitePatterns Nt-dnaJ domain signature. 48 67 IPR018253 -
Pte3g01875 337 SMART dnaj_3 5 63 IPR001623 -
Pte3g01875 337 Pfam X-domain of DnaJ-containing 135 322 IPR026894 -
Pte3g01875 337 CDD DnaJ 7 60 IPR001623 -
Pte3g01875 337 PANTHER DNAJ HEAT SHOCK N-TERMINAL DOMAIN-CONTAINING PROTEIN 4 328 - -
Pte3g01875 337 SUPERFAMILY Chaperone J-domain 5 100 IPR036869 -
Pte3g01875 337 Gene3D DnaJ domain 3 84 IPR036869 -
Pte3g01875 337 PRINTS DnaJ domain signature 26 41 IPR001623 -
Pte3g01875 337 PRINTS DnaJ domain signature 8 26 IPR001623 -
Pte3g01875 337 PRINTS DnaJ domain signature 43 63 IPR001623 -
Pte3g01875 337 PRINTS DnaJ domain signature 63 82 IPR001623 -
Pte3g01875 337 Pfam DnaJ domain 7 68 IPR001623 -
Pte3g01875 337 ProSiteProfiles dnaJ domain profile. 6 71 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte3g01875 Pte-Chr3 29831932 29836148 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte3g01875 7 69 Miscellaneous Gene Families AT1G16680 47.692 8.43e-10 58.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte3g01875 - - gmx:100787075 531.561
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte3g01875 3 29831932 29836148 Pte3g01875 3 29831932 29836148 RCT