Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte3g01873 ATGGGAGCTGCTTGTTGTGTTGCTGCCAAAGATAAAACTATACCTAATGGTTCCAGTGGTGAACTCTTGCATAGGAATATTCGGTTTTCTCCATCATGGAATTTTCGATGGGATCATCGAGGACGAGTAGCAGGCGAAGATACTGCTCTTAATTGTTTTGCTGATGATATTGGACATGATGAAGGTTTAGATAATAAAAACGAATCTTCTTATTCATCAGATTATGGAAGTCCTGAAAATATTCGGAGAGTTATGGAGCAAACCCAACCAATTTCTACAGGAATTGCCAGCAATGAGAGTACTTCAATTGCAGATCAATCAATTTCAAGGAACTTTTCCATTGATATAAATATGGAGCAGGTGAAGGAGCCTATGGAATTTCGTACAGTGCCACACCCATCTCCAGCCAAATTATCTCATTCGTTGCCTACAACTTCAATGACTTCATCACCACTTTTATCCCAAAGCTATTTGCTTCCTGCCTGCACAACCCCTCTCAGATGGCCCCGCCGCTGTACTAGACAACTTTTGCGACAAGGTTCTGATGACCATATTGGAGGTTTTAAGTCACCAAGTAGCTTCTCAGCATTGGAGGAAATGCGAGTTTTTTCCTCATGGGGTAATGATTCAACTAAGAGTTCCCTTGGTGGTTCTTCAGATGGTTTGTCTGTACCTTTCTTTTCAGAGGTGATGGCCCCGTATGGAGAGAGGTGGTCTTTTGACAATGAGTCCTTCGGTATTAACCATGAGAAATTTACTCGATCCAGTAGCAAGATTACTCCTCCATCTGTTGATTTGCAAACATGTGGTGTTTGCTCAAAGCTTTTGTCTGAGAAGTCTGCATGGAGCACCCAAAGGATATTTGCGACAAACGACCATTCTGTGGTGGCTATTCTTGTTTGTGGACACGTTTATCATGCAGAGTGTTTGGAGCGAACAACACCCGAAGTGAACAAGTATGATCCCACTTGCCCAGTTTGCAATTATGGCGAGAAACATACTCTCAAGTTATCTGAAAAAGCATTGAAGGCTGAAATGGAGTTGAGGAGAAACAAAAATTCCAGGAACCATGTTGTGAATAGTGATCTTGATTATGATCCTCTTGTGTTTGATCACTTGAAAGAGACATATCAAGTGAAGATTCGGTGGTTCGATCCCAATTCCAGCTCCAGCAAGAAGTGGTCCTTTGCGAGACCTTTTCTGAAGCGGCAGTTATCATTTGGTTCAAAGGGCTTGAGAACGGTGTCCTCTAATCATTCTGCTAAGAGGAAAGGCTTCTTCTGGGCAAAATCAAGCAAGGAGTAG 1305 0.4238 MGAACCVAAKDKTIPNGSSGELLHRNIRFSPSWNFRWDHRGRVAGEDTALNCFADDIGHDEGLDNKNESSYSSDYGSPENIRRVMEQTQPISTGIASNESTSIADQSISRNFSIDINMEQVKEPMEFRTVPHPSPAKLSHSLPTTSMTSSPLLSQSYLLPACTTPLRWPRRCTRQLLRQGSDDHIGGFKSPSSFSALEEMRVFSSWGNDSTKSSLGGSSDGLSVPFFSEVMAPYGERWSFDNESFGINHEKFTRSSSKITPPSVDLQTCGVCSKLLSEKSAWSTQRIFATNDHSVVAILVCGHVYHAECLERTTPEVNKYDPTCPVCNYGEKHTLKLSEKALKAEMELRRNKNSRNHVVNSDLDYDPLVFDHLKETYQVKIRWFDPNSSSSKKWSFARPFLKRQLSFGSKGLRTVSSNHSAKRKGFFWAKSSKE* 435
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte3g01873 434 ProSiteProfiles Zinc finger RING-type profile. 269 328 IPR001841 -
Pte3g01873 434 CDD RING-H2 269 328 - -
Pte3g01873 434 SUPERFAMILY RING/U-box 268 329 - -
Pte3g01873 434 PANTHER EXPRESSED PROTEIN 1 333 - -
Pte3g01873 434 SMART ring_2 269 327 IPR001841 -
Pte3g01873 434 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 249 329 IPR013083 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte3g01873 Pte-Chr3 29823586 29827488 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte3g01873 - - qsu:112020747 479.174
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte3g01873 3 29823586 29827488 Pte3g01873 3 29823586 29827488 RCT