Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte3g01847 ATGCTGGCCCTTCGTCATCTACCATTGCCAAAACCTTCAACTGTGAGCAATGTGATAAACCCTTTACGCGTCAACCAGCTGAGTTATTGGATTCAGCCGGTTAATCAAAAAGGCGTGTTACATGGACTACCTCTTGTTAGAAGAACAACAATAAAGTGTATGGCTCATCCCAGGAGAGTGAAAATGGTATCTAAGCAGATACAGAGGGAGATTTCGGATATGCTGCTCAATGATGAAATTTTACGATATGCTGTTCTTCCCGAAGCTTCTCTAGGAGCTGATAGGTACCTCTCTTCTTTGGCGACAATTACTGACGTCGAAGTCTCCAGGGATTTGCAGGTGGTAAAAGTATATGTGTCCGTCTTTGGTGACAAAAGAGGTAAAGAAGTTGCAATTGCTGGGTTAAAATCCAAAGCTAAATATGTCCGTGGTCAGTTAGGTAGGCGTATGAAGTTGCGGCTGACTCCAGAAATACGCTTTATAGAAGATGACTCTTATGAGAGAGGAAGCAGGGTGATTGCCATTCTAGATAAACTAAAGGAGGAAGCTGAAAGGGATGAAGCTGATGGATCTGACGACAGTGAAGATGATGAGGATTCTGAAGAAGAAGATGATGATGATGATTGGGATGATGAGGAACCTGATGAAAAAATTATATATGTGAATTAG 669 0.42 MLALRHLPLPKPSTVSNVINPLRVNQLSYWIQPVNQKGVLHGLPLVRRTTIKCMAHPRRVKMVSKQIQREISDMLLNDEILRYAVLPEASLGADRYLSSLATITDVEVSRDLQVVKVYVSVFGDKRGKEVAIAGLKSKAKYVRGQLGRRMKLRLTPEIRFIEDDSYERGSRVIAILDKLKEEAERDEADGSDDSEDDEDSEEEDDDDDWDDEEPDEKIIYVN* 223
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte3g01847 222 Hamap Ribosome-binding factor A [rbfA]. 58 176 IPR000238 GO:0006364
Pte3g01847 222 ProSitePatterns Ribosome-binding factor A signature. 142 163 IPR020053 GO:0006364
Pte3g01847 222 Gene3D - 54 170 IPR015946 -
Pte3g01847 222 SUPERFAMILY ARM repeat 170 215 IPR016024 -
Pte3g01847 222 PANTHER RIBOSOME-BINDING FACTOR A, CHLOROPLASTIC-RELATED 46 222 IPR000238 GO:0006364
Pte3g01847 222 Pfam Ribosome-binding factor A 59 175 IPR000238 GO:0006364
Pte3g01847 222 MobiDBLite consensus disorder prediction 182 222 - -
Pte3g01847 222 MobiDBLite consensus disorder prediction 186 215 - -
Pte3g01847 222 SUPERFAMILY Ribosome-binding factor A, RbfA 54 179 IPR023799 -
Pte3g01847 222 NCBIfam 30S ribosome-binding factor RbfA 54 181 IPR000238 GO:0006364
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte3g01847 K02834 - qsa:O6P43_011526 254.218
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte3g01847 3 29366314 29371260 Pte3g01847 3 29366314 29371260 RCT