Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte3g01832 ATGGAGTTGAAGCCTGGTTTATCAGCCTTAGTCACCGGTGGAGCTTCCGGGATTGGCAAAGCACTAAGTTTGGCTCTTGCCGAAAAGGGAGTATTCGTGACGGTGGTTGATTACTCCGAAGAAAAAGGACGAGAAGTTGCGTGTCTTGCAGAGAAACTAAACTCCAAGTTCCATTCGAACTCTGAAGTACCGACTGCTCTGTTTGTGAAATGCGATGTCTCTAACTCAAGTGAGATAGCCAATGCGTTTGACACACATTTGAGGACGTATGGAGGTTTAGATATATGTATCAATGGTGCTGGCATCGTTTCTCTTGTATTGTTCTATGAAGATAACTCTAATGCTTGGAGGCGCGCTGTTGATGTCAACCTCTCCGCAGTGGTTGAATGCACTCGACTAGCGATTAAGACTATGGAAGCTTTGCAAAAGCCTGGTGTGATAATCAATATGGGTTCTGCTTCTGGGCTTTATCCTATGTACAATGATCCTATCTATGCTGCCACAAAAGGTGGTGTTATTATGCTTACTAGATCACTTGCTCCGTTAAAGCGTAAACGTATTCGCGTTAATGTACTTTGTCCAGAGTTTGTCGAAACAGAAATGGGCTCAAAAATCAATCCAAAGTTTGTCGATCTATTAGGTGGCTTTGTACCAATGGAAAAGGTTATAAAAGGTGCCTTTGAATTGATTAAGGATGAGAGCAAAGCTGGCTCTTGCTTGTGGATTACTAACCGTCGAGGAATGGAATATTGGCCCACTCCTTCAGAAGAAGCAAAATATATGCTTCCTAAAGCAAGTTCTAGGAAGAAATATGCTACTAAAGTTCCACTACATGTAAATCTTCCTCAAACTTTTGAGAAAATAATCGTTCATACTTTGGACCATAATTTCCGGAGTGCTACCAGTATATTACGTGTGGCATTAAGATTGCCTATTGAACCCCACCATGTTCTTATCAAAATAATTTATGCTGGAGTAAATGCTAGTGATGTAAACTTCAGCTCAGGTCGATATTTTGTTGGCAAAACTGAAGAAATTAGCTCGCTTCTTCCTTTTGATGCAGGATTTGAGGCTGTAGGCATAATTGCTGCAGTAGGAGAGTCTGTCACAGGCCTGACAGTTGGCATGCCATCTGCGGTCATGACTTTTGGAAGCTATGCTGAATTCATTACGGTTCCTTCAAAACATGTCTTTCCTGTGCCAAGGCCAGATCCAGAAGTTGTTGCAATACTTACTTCAGGTCTAACAGCATCGATAGCTTTAGACAAGGCAGGACAGATGGAATCTGGAAAAACTGTCCTTGTTACTGCTGCCGCTGGAGGGACTGGGCAATTTGCAGTTCAGCTGGCAAAATTAGCTGGAAAAACTGTGGTGGCCACTTGCGGAGGTCAGGACAAGGCCCGGCTTTTAAAAGGACTGGGAGTTGACCGAGTGATTGACTACAGAACTGAAGATATTAAAACTGTTCTATGCAAAGAATTTCCAAAAGGCTTTGACATCATCTATGAATCAGTTGGTGGCAACATGTTTAATGTGTGTTTAAATGCATTAGCAGTACATGGGCGACTCATTATAATTGGAATGATCTCTCAGTATCAAGGTAAGCATGGTTGGACACCATCAAACTATCCAGGACTATGCGAAAAGCTGTTGATGAAAAGCCAAACTGTGGCTGGATTTTTTCTGGTACACTACAGTCACTTGTGGCAACAGCATCTGGACAGACTTATTGATCTTTATTCTACCGGAAAGCTAAAGGTTGCAATGGACCCAAAAGGGTTTGTCGGCCTCCATGCCGTGGCAGATGCAGTTGAGTACCTCCACTCGGGCAAAAGCCTCGGAAAGGTGGTTGTTTGCATAGACCCTGCCTTCCAAAATCAAGTATCCAAATTATGA 1896 0.4283 MELKPGLSALVTGGASGIGKALSLALAEKGVFVTVVDYSEEKGREVACLAEKLNSKFHSNSEVPTALFVKCDVSNSSEIANAFDTHLRTYGGLDICINGAGIVSLVLFYEDNSNAWRRAVDVNLSAVVECTRLAIKTMEALQKPGVIINMGSASGLYPMYNDPIYAATKGGVIMLTRSLAPLKRKRIRVNVLCPEFVETEMGSKINPKFVDLLGGFVPMEKVIKGAFELIKDESKAGSCLWITNRRGMEYWPTPSEEAKYMLPKASSRKKYATKVPLHVNLPQTFEKIIVHTLDHNFRSATSILRVALRLPIEPHHVLIKIIYAGVNASDVNFSSGRYFVGKTEEISSLLPFDAGFEAVGIIAAVGESVTGLTVGMPSAVMTFGSYAEFITVPSKHVFPVPRPDPEVVAILTSGLTASIALDKAGQMESGKTVLVTAAAGGTGQFAVQLAKLAGKTVVATCGGQDKARLLKGLGVDRVIDYRTEDIKTVLCKEFPKGFDIIYESVGGNMFNVCLNALAVHGRLIIIGMISQYQGKHGWTPSNYPGLCEKLLMKSQTVAGFFLVHYSHLWQQHLDRLIDLYSTGKLKVAMDPKGFVGLHAVADAVEYLHSGKSLGKVVVCIDPAFQNQVSKL* 632
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte3g01832 631 ProSitePatterns Short-chain dehydrogenases/reductases family signature. 152 180 IPR020904 GO:0016491
Pte3g01832 631 SUPERFAMILY GroES-like 302 434 IPR011032 -
Pte3g01832 631 CDD Mgc45594_like 284 619 - -
Pte3g01832 631 Gene3D - 409 587 - -
Pte3g01832 631 SMART PKS_ER_names_mod 298 618 IPR020843 GO:0016491
Pte3g01832 631 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 8 254 IPR036291 -
Pte3g01832 631 Pfam Alcohol dehydrogenase GroES-like domain 314 381 IPR013154 -
Pte3g01832 631 PANTHER SHORT-CHAIN DEHYDROGENASE/REDUCTASE 281 620 - -
Pte3g01832 631 FunFam Prostaglandin reductase 2 409 587 - -
Pte3g01832 631 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 406 584 IPR036291 -
Pte3g01832 631 Pfam short chain dehydrogenase 9 207 IPR002347 -
Pte3g01832 631 Gene3D - 290 618 - -
Pte3g01832 631 Pfam Zinc-binding dehydrogenase 441 575 IPR013149 -
Pte3g01832 631 PRINTS Glucose/ribitol dehydrogenase family signature 139 155 IPR002347 -
Pte3g01832 631 PRINTS Glucose/ribitol dehydrogenase family signature 165 184 IPR002347 -
Pte3g01832 631 PRINTS Glucose/ribitol dehydrogenase family signature 8 25 IPR002347 -
Pte3g01832 631 PRINTS Glucose/ribitol dehydrogenase family signature 185 202 IPR002347 -
Pte3g01832 631 PRINTS Glucose/ribitol dehydrogenase family signature 91 102 IPR002347 -
Pte3g01832 631 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 91 102 IPR002347 -
Pte3g01832 631 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 145 153 IPR002347 -
Pte3g01832 631 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 165 184 IPR002347 -
Pte3g01832 631 ProSitePatterns Quinone oxidoreductase / zeta-crystallin signature. 430 451 IPR002364 GO:0008270|GO:0016491
Pte3g01832 631 Gene3D - 6 262 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte3g01832 Pte-Chr3 29138513 29147037 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte3g01832 10 221 Acyl Lipid Metabolism Gene Families AT1G24360 32.093 4.69e-24 101
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte3g01832 - - qsa:O6P43_031019 979.163
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte3g01832 3 29138513 29147037 Pte3g01832 3 29138513 29147037 RCT