Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte3g01729 ATGAACCTTCCATATGCGGTCGCTTGCCTTCTGCTCTCATCTCTGGTTGTCTTAGTCTATGCTGAGTCTACTCAACCTCCTTATGCATGTGACTCGTCTATTCCTTCCACTCAATCATACGCATTTTGCAAAACCACACTGCCTATCAGCCAAAGGGCTAAGGACCTTGTCTCCCGCTTAACATTGGATGAGAAAATCTCACAACTCGTTAACACCGCTCCCCCGATTCCACGACTCGGTATCCCAGGATATGAATGGTGGAATGAAGCATTACACGGGGTTGCAAATGCTGGGCTTGGCATTCGATTTAACGGGTCCATCCCATCTGCAACTAGCTTCCCTCAAGTCATTCTCACTGCTGCTTCCTTCGACTCCAATCTATGGTATCGCATTGCCCAGGTGATAGGAAAGGAAGCTAGAGCAGTGTATAATGCTGGACAAGCAGTGGGGCTAACATTTTGGGCTCCAAACATTAACATATTCAGAGATCCAAGATGGGGAAGAGGGCAAGAGACACCAGGAGAAGATCCACTGGTGACAGGAAAGTATGCAGTTGCATATGTGAGGGGGCTGCAAGGTGATTCTTTCGATGGAAGGAGGAAGCTCAAAGGGCATCTTCAAGCTTCAGCTTGCTGCAAGCATTTTACTGCGTATGATTTGGACAACTGGAACCATTTGGATCGTTTTGTCTTCGATGCTAGGGTCACTAAGCAAGATTTAGCAGACACATACCAGCCACCATTCCAGAGCTGCGTACAGCAAGGCCGAGCTAGTGGTATCATGTGTGCCTACAACCGCGTCAATGGAGTGCCAAACTGTGCAGATTTCAATCTCTTATCCAATATTGCTAGACGCCAATGGGATTTTCATGGGTACATCACTTCGGATTGCGGAGCCGTCTCAATTATTTATGAAAAGCAAGGCTACGCCAAATCACCGGAAGAAGCCATTGCTGACGTCCTAAGAGCTGGAATGGATGTAGAATGTGGTTCGTACATGGAAAAGAATGCTAAATCGGCAGTGATTCAGAGAAAAGTGGCTATATCTGAAATAGACAGAGCACTCATCAATCTCTTCTCTGTCAGAATGAGGCTTGGCCTGTTCGATGGCAACCCAACCAAGCTCCTCTACGGCAACATAGGTTCAAACCAAGTTTGCTCCAAAAAGCACCAGGGCCTGGCTCTTCAAGCTGCAAGGGATGGCATTGTCCTTTTGAAAAACTCTGGCAGACATCTTCCACTTGTTAAATCAACTTCCAAAATGTCCCTTGCTGTAATAGGCCCCAATGCCAACGCAGCAACTACTCTTCTAGGAAACTACGCAGGCCCTCCTTGTAAAATCATTACACCACTTCAAGCACTGCAGAGCTATGTAAAGGACGTTACTTATCATCCGGGTTGTCAAGATGTCATGTGTTCTTCGGCTACAGTCGAAGAAGCGGTGGAAATTGCAAAGAAGGTAGATTATGTGGTTTTAGTTATGGGGTTGGACCAAAGTATTGAAAGGGAGTCACTTGATCGGATGCAATTAGATTTACCAGGAAAGCAACAAGATCTTATCAACCGTGTTGCTAGTGCTTCAAAGGAACCTGTTATTTTGGTGATCCTATCTGGTGGACCCGTTGATATAACATCAGCCAAGTATGACAAGAAGATTGGAAGCATCCTCTGGGCCGGTTATCCGGGTCAAGCTGGAGGAACTGCTCTTGCTGAAATCATCTTTGGTGACCATAATCCAGGTGGGAGGCTACCAGTTACTTGGTACCCGAAGGATTTTATCGAGGTACCCATGACAGACATGAGGATGAGGCCAGATCCATCATCAGGCTATCCTGGTAGAACTTATCGTTTCTACAAAGGTAAAAAGGTGTTCGAATTTGGTTACGGCCTAAGTTACTCGGGGTATGCTTATGAGTTCGTCACTGTCACACAGAGCAAGCTGTACTTGAACGAGTCAAAAACTTATGAACTGGTTGATAACTCCGGTACAGTTCATTACAAGTTGGTATCAGAGATGGATACCCAAATTTGTCAGAGGATGCTGGCTTCAGTGAAAGTAGGAGTCACGAATCATGGTACTCTGATGGGTAAGCATCCGGTTTTGCTGTTTACAAGACCTGAAAGACAAAGAAAAGGAAACCCCATCAAACAACTAGCTGACTTTCAGAGTGTGAAACTAAAACCTGGGGAAAGAGCTGAAATTGAATTCTTGGTCAGCCCCTGCGAACACCTAAGCAGAGCAAATGAAGAGGGTCTGAAGCTAATTGAAGAAGGGTCTTATTTCTTGATGGTTGGAAATGAAGAGCACCCAATTAATATCATATTTTAA 2328 0.454 MNLPYAVACLLLSSLVVLVYAESTQPPYACDSSIPSTQSYAFCKTTLPISQRAKDLVSRLTLDEKISQLVNTAPPIPRLGIPGYEWWNEALHGVANAGLGIRFNGSIPSATSFPQVILTAASFDSNLWYRIAQVIGKEARAVYNAGQAVGLTFWAPNINIFRDPRWGRGQETPGEDPLVTGKYAVAYVRGLQGDSFDGRRKLKGHLQASACCKHFTAYDLDNWNHLDRFVFDARVTKQDLADTYQPPFQSCVQQGRASGIMCAYNRVNGVPNCADFNLLSNIARRQWDFHGYITSDCGAVSIIYEKQGYAKSPEEAIADVLRAGMDVECGSYMEKNAKSAVIQRKVAISEIDRALINLFSVRMRLGLFDGNPTKLLYGNIGSNQVCSKKHQGLALQAARDGIVLLKNSGRHLPLVKSTSKMSLAVIGPNANAATTLLGNYAGPPCKIITPLQALQSYVKDVTYHPGCQDVMCSSATVEEAVEIAKKVDYVVLVMGLDQSIERESLDRMQLDLPGKQQDLINRVASASKEPVILVILSGGPVDITSAKYDKKIGSILWAGYPGQAGGTALAEIIFGDHNPGGRLPVTWYPKDFIEVPMTDMRMRPDPSSGYPGRTYRFYKGKKVFEFGYGLSYSGYAYEFVTVTQSKLYLNESKTYELVDNSGTVHYKLVSEMDTQICQRMLASVKVGVTNHGTLMGKHPVLLFTRPERQRKGNPIKQLADFQSVKLKPGERAEIEFLVSPCEHLSRANEEGLKLIEEGSYFLMVGNEEHPINIIF* 776
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte3g01729 775 SMART Fn3_like_2 698 768 IPR026891 -
Pte3g01729 775 FunFam probable beta-D-xylosidase 7 52 374 - -
Pte3g01729 775 PRINTS Glycosyl hydrolase family 3 signature 208 224 IPR001764 GO:0004553|GO:0005975
Pte3g01729 775 PRINTS Glycosyl hydrolase family 3 signature 282 300 IPR001764 GO:0004553|GO:0005975
Pte3g01729 775 PRINTS Glycosyl hydrolase family 3 signature 113 132 IPR001764 GO:0004553|GO:0005975
Pte3g01729 775 Gene3D - 387 633 IPR036881 GO:0004553|GO:0005975
Pte3g01729 775 Pfam Glycosyl hydrolase family 3 C-terminal domain 402 632 IPR002772 GO:0004553|GO:0005975
Pte3g01729 775 PANTHER SUGAR HYDROLASE-RELATED 18 771 IPR044993 GO:0009044|GO:0045493
Pte3g01729 775 FunFam probable beta-D-xylosidase 2 387 633 - -
Pte3g01729 775 Pfam Glycosyl hydrolase family 3 N terminal domain 108 355 IPR001764 GO:0004553|GO:0005975
Pte3g01729 775 Gene3D - 52 375 IPR036962 GO:0004553|GO:0005975
Pte3g01729 775 Pfam Fibronectin type III-like domain 700 766 IPR026891 -
Pte3g01729 775 SUPERFAMILY (Trans)glycosidases 40 401 IPR017853 -
Pte3g01729 775 SUPERFAMILY Beta-D-glucan exohydrolase, C-terminal domain 402 635 IPR036881 GO:0004553|GO:0005975
Pte3g01729 775 Gene3D Immunoglobulins 663 774 IPR013783 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte3g01729 Pte-Chr3 16954403 16958267 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte3g01729 22 771 Glycoside Hydrolase AT1G78060 67.021 0.0 1056
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte3g01729 - - aprc:113867121 1160.21
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte3g01729 3 16954403 16958267 Pte3g01729 3 16954403 16958267 RCT