Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte3g01711 ATGTCAGGTGACAGTGACGGCGGTGGATGCAGTATCGTATGGTTCAGGAGAGATCTGAGAGTAGAAGATAATCCGGCATTAACAGCTGGAGTCAGAGCCGGTGCTGTTGTTGCTGTTTTCATATGGGCTCCAGAGGAAGAGGGTCACTACCAACCTGGCAGGGTGTCAAGGTGGTGGCTCAAACACAGCTTAGCTCATCTCGATTATTCTTTGAGAAGTCTAGGCACTTCCCTCATCACCAAGAGGTCAACTGATAGTGTCTCTTCTCTGCTTGAGATTGTTACGTCCACTGGTGCCACTCAGCTTTTCTATAACCATTTATATGATCCCCTGTCACTGATCAGGGACCATCGAGCAAAGGAGGTTCTTACTGCTCATCGCGTAGTAGTTCGTTCATTCAATGCAGATTTACTATATGAACCGTGGGATGTGAATGATGCCGATAGTCGTCCATTCACAACCTTCTCTGCTTTCTGGGAAAGGTGCCTTAGCATGCCTTATGACCCGGAGGCACCACTTCTCCCTCCCAAAAAGATAATTCAAGGTGATGTATCAAGTTGCCCATCTGATACATTGGTGTTTGAAGATGAATTAGAGAAGGCAAGCAATGCACTTCTTGCTCGAGCATGGTCACCTGGATGGAGCAATGCTGACAAAGCTCTGACAACATTCGTTAATGGGCCCCTAATTGAGTACTCTAAAAATCGAAGGAAGGCTGATAGCGCCACAACCTCATTTCTGTCCCCCCATTTGCATTTTGGAGAGGTGAGTGTGAGAAAGTTATTTCATCTTGTTCGCATCAAGCAGGTCTTGTGGGCTAATGAAGGTAACAAGGCAGGTGAGGAGAGTGTGAATTTGTTTCTTAAGTCAATTGGTCTAAGAGAATATTCAAGGTACATGAGTTTCAACCATCCCTATAGTCATGAAAGGCCTCTTCTAGGCTACCTAAGGTTCTTCCCCTGGAATACAAATGAAGGCCTTTTCAAGGCATGGAGGCAAGGCCGAACTGGCTATCCATTGGTAGATGCAGGCATGAGAGAGTTGTGGGCCACTGGATGGTTACATGATCGAATAAGAGTTGTCGTTTCCAGTTTCTTTGTGAAGGTTCTGCAGCTTCCATGGAGATGGGGTATGAAATATTTCTGGGATACCCTGTTGGATGCAGATCTTGAGAGTGATGCTCTTGGCTGGCAGTACATTACTGGTACCCTTCCTGATGGTCGTGAATTTGATCGAATTGATAATCCACAGTTTGAGGGTTACAAATGTGACCCTAATGGAGAATATGTAAGACGCTGGCTTCCTGAACTGTCCAGACTTCCAACTGAATGGATACATCATCCGTGGAATGCCCCTGAATCAATACTCCAAGCCGCTGGAATTGAGCTGGGGTCAAACTACCCTCTTCCAGTTGTTGGAATTGATGCGGCAAAGGACAGGTTGCAAGCTGCACTTAAAGAAATGTGGGAGCTAGAAGCAGCTTCTAGAGCTGCGATAGAAAATGGTACTGAGGAAGGACTTGGAGAGTCATCCGAATGGACTCCTATTGCTTTTCCTCCAGATGTACAGATGGAAGAAAACCATGAACTTATGAGGAACAACCCCATTCCTCTTGTGAGGCGATATGAGGATCAGATGGTCCCAAGCATGACTTCATCTCTGATTAGATTGGATGAGGAAGTAGCCTCCTTGGATCAAAGCTCCCCAGACCATACCAGAGCACAAGTGCTCTCAAATGTAAATTTAAATCAGCAAGCAGGAAGAGGCACACTCAACCAAGGTGTACTTCAGACTGTTCAGGCAGGTCCTCGGCAGCAGTATGACACAATGATTGAGCTGCAGAGTGCTGCTGAAGATTCTACTGCAGAATCTTCTAGTACCGGTAGGAGAGAAAGAGATGGAGGCATAGTTCCAGTGTGGTGTCCACCAACTTCTAGTAACTCAGAGCAATTTTCTGATGACGAAACTGGTATAGGAAACAGTTCATCTTATTTACAGAGGCACCCTCAGTCTCACCGGTCAATCAACTGGAGGCGGCTACCACAAACAGGGGAGAAGGAGATGGTGAATCCATCCTCACAGAAGTGTTGGGGCACACAGATTGGAATCATTTGTACATACATTCAATGTTTTCATCTGCATCTCCTCCTTTCAGCCCTCAAGCATATTATTCTTGGCATCATTGGCCGATGCACCGAATGCATGAAATTTTTAAATTAA 2220 0.4586 MSGDSDGGGCSIVWFRRDLRVEDNPALTAGVRAGAVVAVFIWAPEEEGHYQPGRVSRWWLKHSLAHLDYSLRSLGTSLITKRSTDSVSSLLEIVTSTGATQLFYNHLYDPLSLIRDHRAKEVLTAHRVVVRSFNADLLYEPWDVNDADSRPFTTFSAFWERCLSMPYDPEAPLLPPKKIIQGDVSSCPSDTLVFEDELEKASNALLARAWSPGWSNADKALTTFVNGPLIEYSKNRRKADSATTSFLSPHLHFGEVSVRKLFHLVRIKQVLWANEGNKAGEESVNLFLKSIGLREYSRYMSFNHPYSHERPLLGYLRFFPWNTNEGLFKAWRQGRTGYPLVDAGMRELWATGWLHDRIRVVVSSFFVKVLQLPWRWGMKYFWDTLLDADLESDALGWQYITGTLPDGREFDRIDNPQFEGYKCDPNGEYVRRWLPELSRLPTEWIHHPWNAPESILQAAGIELGSNYPLPVVGIDAAKDRLQAALKEMWELEAASRAAIENGTEEGLGESSEWTPIAFPPDVQMEENHELMRNNPIPLVRRYEDQMVPSMTSSLIRLDEEVASLDQSSPDHTRAQVLSNVNLNQQAGRGTLNQGVLQTVQAGPRQQYDTMIELQSAAEDSTAESSSTGRRERDGGIVPVWCPPTSSNSEQFSDDETGIGNSSSYLQRHPQSHRSINWRRLPQTGEKEMVNPSSQKCWGTQIGIICTYIQCFHLHLLLSALKHIILGIIGRCTECMKFLN* 740
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte3g01711 739 ProSitePatterns DNA photolyases class 1 signature 1. 336 348 IPR018394 -
Pte3g01711 739 Pfam Blue/Ultraviolet sensing protein C terminal 515 628 IPR020978 -
Pte3g01711 739 MobiDBLite consensus disorder prediction 641 675 - -
Pte3g01711 739 NCBIfam cryptochrome photoreceptor 10 485 IPR014134 GO:0009785|GO:0009882
Pte3g01711 739 MobiDBLite consensus disorder prediction 615 675 - -
Pte3g01711 739 Coils Coil 474 494 - -
Pte3g01711 739 Pfam FAD binding domain of DNA photolyase 287 486 IPR005101 -
Pte3g01711 739 Gene3D - 138 297 - -
Pte3g01711 739 ProSitePatterns DNA photolyases class 1 signature 2. 356 375 IPR018394 -
Pte3g01711 739 Gene3D HUPs 12 210 IPR014729 -
Pte3g01711 739 SUPERFAMILY Cryptochrome/photolyase FAD-binding domain 196 492 IPR036134 -
Pte3g01711 739 PANTHER CRYPTOCHROME 10 494 IPR002081 -
Pte3g01711 739 Pfam DNA photolyase 11 167 IPR006050 -
Pte3g01711 739 SUPERFAMILY Cryptochrome/photolyase, N-terminal domain 11 181 IPR036155 -
Pte3g01711 739 PRINTS DNA photolyase signature 356 374 IPR002081 -
Pte3g01711 739 PRINTS DNA photolyase signature 395 409 IPR002081 -
Pte3g01711 739 PRINTS DNA photolyase signature 336 352 IPR002081 -
Pte3g01711 739 Gene3D DNA Cyclobutane Dipyrimidine Photolyase, subunit A, domain 3 305 506 - -
Pte3g01711 739 FunFam Deoxyribodipyrimidine photo-lyase 305 494 - -
Pte3g01711 739 ProSiteProfiles Photolyase/cryptochrome alpha/beta domain profile. 9 138 IPR006050 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte3g01711 Pte-Chr3 16671733 16675891 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte3g01711 K12118 - qsa:O6P43_019640 1184.09
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte3g01711 3 16671733 16675891 Pte3g01711 3 16671733 16675891 RCT