Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte3g01689 ATGCCTTTCAAAACCAGAAAGCTCCTAAAAGTCAATAGAAAGCGTCTATCTCAAATTACCTTCCTAACAGAAGTCCAAAGTCAACTCAGTTCGTTTCACTCGTTTTATGATAATACTAACTATAAAGGAAAGAAAAGTAAAGTCGGTTACTCTTTCCGAGTTGTAGTCAGTCATTCTCTTTTCTCAATTCTCATATTCTCAAGATTCGAATTCCCTCTCTACTTCGAAGCTTTTAGTTTCTTTTTCCCATTGCACGAGATGCTCCACTGTCCTGTAGGCTGTGATTCCAGACCTTTATTACAGTTTGCAATGTTCGCTTCAGCTCCTTCTTTAATTAAAACCACTCATTGCTTCAATAAAGCAGAGCATACTTCATTTGCTGGACCTTCGTCTGTTCCCATGGGATTGAAGCTAAGCAAGGGATCAACCGGAAACATCGGCCATCGGATACGCAGAGAGACGATGGCCCGTGGGAGGCATAGGACCAGCGATGCGTATCGTGGTAGAGCTCAGGAGCGTGTTCTTGAGGAAGAAGTGCTAGATACAGATACCAGGACACCTTGGAAACTTTTTCCTGGCCAACCATATCCATTAGGGGTATCTGAAGTTGATAATGGGATCAATTTTGCAATTTTCTCACAACATGCAACTGCTGTCACACTTTGTTTAACTCTTCCCCAGAGGAATAATCTTGGTTCACTGGAAAATGGCATGGTAGAGCTGCCTTTGGATCCCAATGTAAACAAAACAGGAGATATTTGGCACATATATATTGAGGATCTGCCCAAGAGTAATGTTCTTTATGGTTATCGGGTAGATGGGCCTCAAGCTTGGGATCAAGGGCATCGATTTGACAACAGCCTTGTGCTCATTGATCCTTATGCGAAATTGGTTGAAGGACGCCGACATTTTGGGGATGCGAGCATGAAATTATCAAAGTTTCTTGGGACATATGATTTTGATAGCTTGCCCTTCAATTGGGGAGAAAATTACAAGCCTCCAAACATACCTGAGAAGGACCTTGTGATATATGAAATGAATCTCCGGGCATTTACAATTGATGACTCTAGTCGCTTGGACCATAAAATACGTGGCAGCTACCTTGGTGTTATTGAAAAGATTTCGCATCTTTTGGAGCTTGGTATCAACGCAGTGGAGTTATTGCCTATTTTTGAGTTTGATGAGTTTGAGTTCCAAAGGCGCCCAAATCCTAGAGATCACATGATTAATACATGGGGCTACTCAACAATAAATTTTTTCGCTCCCATGAGCCGCTATGCCAGTGCTGGTGGAGGACCAATGAATGCATCCTTGGAGTTTAAGCAAATGGTTAAAGCATTGCACGGTGCTGGGATTGAGGTGATTTTGGATGTTGTATATAACCATACTAATGAGGCTGATGACGCAAACCCATATACTACTTCATTTCGTGGAATAGATAATAAGGTTTATTATATGCTGGATCCAGACAATAAGAGCCATCTGCTGAATTTCTCTGGGTGTGGAAATACATTAAACTGTAACCACCCGGTGGTTATGGAACTTATACTGGACAGCTTAAGACACTGGGTCACTGAATATCATGTGGATGGTTTTAGATTTGACCTTGCTAGTGTTCTTTGTCGAGGAACAGACGGTTCTCCACTTGATGCTCCGCCACTTGTTAGGGCAATTGCGAAAGATGCAGTTCTATCCAGATGTAAAATTATTGCAGAACCTTGGGACTGTGGAGGTCTCTATCTAGTTGGGAGGTTTCCAAACTGGGACAGGTGGGCCGAATGGAATGGGATGTACCGTGATGACATGAGAAAATTTGTAAAGGGTGATTCTGGTATGAAGGGGCACTTCGCTACACGCATTTCTGGGTCTTCTGACCTCTACAAAGTGAACAAGAGAAAGCCTTGTCATGGGATTAATTTTGTCATTGCACATGATGGTTTTACCTTGTATGACCTTGTTTCATACAATTTCAAGCACAATAATGCTAATGGGGAAGGTGGGAATGATGGAAGCAACGACAATTTCAGCTGGAACTGCGGTTATGAAGGAGAAACCGATGATGCCAGTATCAAAGCTTTACGCTCACGGCAAATGAAAAACTTCCACTTGGCACTAATGGTATCCCAGGGAACCCCAATGATGCTAATGGGGGATGAGTATGGGCATACAAGATACGGAAATAACAACAGTTACGGCCATGATACTTCAATCAACCATTTCCAGTGGGCACAGTTGGAGGCAAGAAAGAGAGAACATTTTAGGTTCTTCTCAGAGGTGATAAAGTTTCGGCAAGCACGTGATTTGTTTCGTCGAGAGACTTTTCTCTGCAAAAATGATGTAACATGGCATGAGGATAATTGGGATGACCAGAACAGCAAATTTCTAGCATTCACGCTTCATGACAAAAACGGAAGGGACATTTATCTAGCATTCAATGCTCATGAATATTTTGTTGAAGTCTTGATACCCCCACCTTCTGCAAACAGGAGATGGTTTCGTGTGGTGGATACCAATCTCAAGTCTCCTGATGATTTTGTCCACAATGGTGTCCCTGGCACCGGGGAAACCTATAACGTGGCCCCGTATTCCTCCATTATGCTTGAAGCTAAATCGTGA 2616 0.4262 MPFKTRKLLKVNRKRLSQITFLTEVQSQLSSFHSFYDNTNYKGKKSKVGYSFRVVVSHSLFSILIFSRFEFPLYFEAFSFFFPLHEMLHCPVGCDSRPLLQFAMFASAPSLIKTTHCFNKAEHTSFAGPSSVPMGLKLSKGSTGNIGHRIRRETMARGRHRTSDAYRGRAQERVLEEEVLDTDTRTPWKLFPGQPYPLGVSEVDNGINFAIFSQHATAVTLCLTLPQRNNLGSLENGMVELPLDPNVNKTGDIWHIYIEDLPKSNVLYGYRVDGPQAWDQGHRFDNSLVLIDPYAKLVEGRRHFGDASMKLSKFLGTYDFDSLPFNWGENYKPPNIPEKDLVIYEMNLRAFTIDDSSRLDHKIRGSYLGVIEKISHLLELGINAVELLPIFEFDEFEFQRRPNPRDHMINTWGYSTINFFAPMSRYASAGGGPMNASLEFKQMVKALHGAGIEVILDVVYNHTNEADDANPYTTSFRGIDNKVYYMLDPDNKSHLLNFSGCGNTLNCNHPVVMELILDSLRHWVTEYHVDGFRFDLASVLCRGTDGSPLDAPPLVRAIAKDAVLSRCKIIAEPWDCGGLYLVGRFPNWDRWAEWNGMYRDDMRKFVKGDSGMKGHFATRISGSSDLYKVNKRKPCHGINFVIAHDGFTLYDLVSYNFKHNNANGEGGNDGSNDNFSWNCGYEGETDDASIKALRSRQMKNFHLALMVSQGTPMMLMGDEYGHTRYGNNNSYGHDTSINHFQWAQLEARKREHFRFFSEVIKFRQARDLFRRETFLCKNDVTWHEDNWDDQNSKFLAFTLHDKNGRDIYLAFNAHEYFVEVLIPPPSANRRWFRVVDTNLKSPDDFVHNGVPGTGETYNVAPYSSIMLEAKS* 872
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte3g01689 871 Pfam Carbohydrate-binding module 48 (Isoamylase N-terminal domain) 197 295 IPR004193 GO:0004553|GO:0005975
Pte3g01689 871 SUPERFAMILY E set domains 192 329 IPR014756 -
Pte3g01689 871 CDD AmyAc_Glg_debranch 325 765 - -
Pte3g01689 871 Gene3D Glycosidases 321 777 - -
Pte3g01689 871 Gene3D Immunoglobulins 178 316 IPR013783 -
Pte3g01689 871 CDD E_set_GDE_Isoamylase_N 196 345 IPR044505 -
Pte3g01689 871 FunFam Glycogen debranching enzyme 321 777 - -
Pte3g01689 871 Gene3D - 778 871 IPR013780 -
Pte3g01689 871 Pfam Alpha amylase, catalytic domain 366 486 IPR006047 GO:0005975
Pte3g01689 871 SUPERFAMILY Glycosyl hydrolase domain 778 870 - -
Pte3g01689 871 PANTHER GLYCOGEN DEBRANCHING ENZYME 169 870 - -
Pte3g01689 871 SMART aamy 345 754 IPR006047 GO:0005975
Pte3g01689 871 SUPERFAMILY (Trans)glycosidases 324 770 IPR017853 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte3g01689 Pte-Chr3 16316066 16336020 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte3g01689 118 870 Glycoside Hydrolase AT4G09020 72.281 0.0 1151
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte3g01689 K01214 - qsa:O6P43_019609 1243.02
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte3g01689 3 16316066 16336020 Pte3g01689 3 16316066 16336020 RCT