Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte3g01432 ATGTTTGTCCCACAGTGTCGTCTAAGTCTACGTCTAGCACAGAGCTCAAAGCTGATTCGCAGGATGTTCTCTGAAAAGACTGCGACAGAAGCTGGTGAAGGGAGACTCTCTGAAACAAAAACAAAATACTCTCCGACTTTTCCCCAATCGCCGCCGACTACTGACAGCAACAGTAACAGCCCTAATTTCCCGGGAAAAAACTTAGTGTCTCCATGGTCTCATATTGTTCGAGGAGGTGATTCCGAGTCGACCGCCACCGTTCCTCAATCTTCGAAGTCCCCATCACAATCACCGGTGGCCTCTCCGCAGGCCCAAACTACTTCTGATTCCTCTGGTATGGCGACTGCTTCTTTTCCGTTGCCACGGTCAACGCTGAAACCAGAGGACACTGTCACAGACGCTAATTGCTCCGAAGGAAAGAACTGTAACGTTGGTCTACCTAAAAAGCAGGCTTGGAAGAAACCTCCGAACGGCATTGTTGAGCCCGCAGTGGAAATGGATATTCTATCTTGGCCGCTTTTATCTGAGATTAATAAGGCTCCAGCTAAAGTGCCCGCCAACTCCTCAAATGTTGTCGCTGATGGATCACTCTCCACATCCCAGGGGTCTGTGCCTTCTAATCAGAAACAAGGTAGGATCAGTGGAAAAGTTATTTCTGGAACAAACCACACCGTGTCTAATCGTCACAGATTTGTGAAGGCTGGTAGTGGTAATAGGAATATGGGGGCTGGTGCCCCTGTACAGAGCACTTCCCCCCATCCTCCTCTGCCACCGTCTCCTCCTCCATTCCCTGTATTCCCACTACCTCCCGCAAATAATGGGACAGTGATACCATTGGGGGGAAGTAATTGGGATACAAGACTTCCCAGAGATTTTGCATTCCAATCTCATGGCAATATTGATCACCAAAGCTCAGGTCGTAGAGGCAGCTTTAGGCCTCAGCCACATGGAGATGCTTCAAATAAGGATGGTGCAAATTATCCAAACTCAAAAGATGGTCATGTACATCAATGTAGCGCATCCCCCAGGGGTTTGGTAAGGCCTCCACCACCTTTTGCACCTCCACCCATGGGACACTTTGTGAGCCCTATGGGTTTTCCTGATTACTATTATTTCCCTACATCCCCTATGGAACCTTTCAGGGGTATGCCATTCTTCACTCATGGCCCACCTCCAGCAATGTTTTTCCCTATTGCGGATTCTCCCCAGACTTCCATGCTAATCAAACAGATAGATTATTATTTCAGTGATGCTAACCTGGCTGGAGATGAGTTTTTGAAGTCCAACATGGATAAGCAGGGCTGGGTTCCCATTGCTTTGATAGCAAGTTTTCCACGAGTGAAAAATATAACAAGCAATGTTCAACTTATACTGAACTCGTTAAGATCTTCAGCTGTTGTTGAAGTAAATGATGACCGAGTCAGAAGGCGTAATGATTGGGTGAAGTGGATACCAACTTCTGTCCGTCAGGAGCCTGACTCCAGTCGGCTATCACCTTTTGAAAGAGATCAGGATAACCTGGAGACTAGTTTTCAAAATATCACCAATGATAAGAGTAGTCACGAAGGTGCTTCAGACCCTGGCTTGGAGGCATCACAAGGAAATGGTTCAACTGAATCTCAGGTTGAGTTGCAACTGCCAAATGGGAATGTCACTGAAAAGCTTGATTGA 1671 0.4704 MFVPQCRLSLRLAQSSKLIRRMFSEKTATEAGEGRLSETKTKYSPTFPQSPPTTDSNSNSPNFPGKNLVSPWSHIVRGGDSESTATVPQSSKSPSQSPVASPQAQTTSDSSGMATASFPLPRSTLKPEDTVTDANCSEGKNCNVGLPKKQAWKKPPNGIVEPAVEMDILSWPLLSEINKAPAKVPANSSNVVADGSLSTSQGSVPSNQKQGRISGKVISGTNHTVSNRHRFVKAGSGNRNMGAGAPVQSTSPHPPLPPSPPPFPVFPLPPANNGTVIPLGGSNWDTRLPRDFAFQSHGNIDHQSSGRRGSFRPQPHGDASNKDGANYPNSKDGHVHQCSASPRGLVRPPPPFAPPPMGHFVSPMGFPDYYYFPTSPMEPFRGMPFFTHGPPPAMFFPIADSPQTSMLIKQIDYYFSDANLAGDEFLKSNMDKQGWVPIALIASFPRVKNITSNVQLILNSLRSSAVVEVNDDRVRRRNDWVKWIPTSVRQEPDSSRLSPFERDQDNLETSFQNITNDKSSHEGASDPGLEASQGNGSTESQVELQLPNGNVTEKLD* 557
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte3g01432 556 SUPERFAMILY "Winged helix" DNA-binding domain 395 485 IPR036390 -
Pte3g01432 556 MobiDBLite consensus disorder prediction 296 350 - -
Pte3g01432 556 ProSiteProfiles La-type HTH domain profile. 397 486 IPR006630 -
Pte3g01432 556 SMART la 401 477 IPR006630 -
Pte3g01432 556 MobiDBLite consensus disorder prediction 488 556 - -
Pte3g01432 556 MobiDBLite consensus disorder prediction 77 118 - -
Pte3g01432 556 MobiDBLite consensus disorder prediction 235 262 - -
Pte3g01432 556 Pfam La domain 407 462 IPR006630 -
Pte3g01432 556 CDD LAM 405 476 - -
Pte3g01432 556 MobiDBLite consensus disorder prediction 530 548 - -
Pte3g01432 556 Gene3D - 398 487 IPR036388 -
Pte3g01432 556 MobiDBLite consensus disorder prediction 195 214 - -
Pte3g01432 556 MobiDBLite consensus disorder prediction 504 522 - -
Pte3g01432 556 PANTHER LUPUS LA PROTEIN-RELATED 171 518 IPR045180 -
Pte3g01432 556 MobiDBLite consensus disorder prediction 26 142 - -
Pte3g01432 556 MobiDBLite consensus disorder prediction 39 67 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte3g01432 Pte-Chr3 12550692 12556015 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte3g01432 K18757 - tcc:18591599 363.229
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte3g01432 3 12550692 12556015 Pte3g01432 3 12550692 12556015 RCT