Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte3g01431 ATGCAACAGGGAGATTATACCTCGGTTCCATATTATCAATTCCCTCATCTCCGAAACCCTTACTCCAATTCCGATCCTATAAATCATAATCCCGGTCCCTCCGATCTTCACCCAGACCGATACGCCTCCGCACCTCCCTTCACTTCCGATGACAAAACCTCCGAGTACAACCCATATCCCTCAAGCTACCATCCACATCTTCTATATTCCGTCTCTGTCCCTGCAACGACCTCAACGCCACCAACCTTAGCTTCTCCCTCTGCCCCCCCTTACCCTCCAACCTCCAATACTGATTATAAGCCAACCTTCAATCTAACTTCTCAATCTCCCTCGTTCCCTCCATTTGAATCTCATCCACCATACCCGCCATCTTCAGAGCAGCAACCTTGTCAGCCGCCGTTCGATCAGCATCTGTCGTCTGCAGCCGGTTACGGGCCAACGCCATCTCCGAATCCAAATTCTACCCCGAATCCCTCATATTCTTCGCCGCCCTCGGCTTCTTATGGTCAACCAACGAGTTCGGCCCCTCCAGCTTACGGCAGTATGTACGAGAAACCTGTGAAATTTGATAGCTCTGTTTCTTATTTTGATGATCGGTCTGGAGGATATAATCCCGTAAGGTACGATTTGAGTTCAGATGGCTACTCTAAGATGTCTGATAGTGGGATTACGAGGTATGACTCAGGTCGTGATAACTTGTATGGCGATGGCCCCATTGAAGTTATCACCTTCCATCTTTCTCTTGCACCTCCTGTTCTAGAACTAGGAAGTGAGGTTTTGGGTACTGTGTTTGATACTAGATTAGGTTTTTTGATGAGCGAAATACTCAACTTTGTTGGTTCTTTGGAACTTGCTTCTTGCCAGATTGGTCTTGATGGAATTCAGATGTTGGATCCCAGTACTAGTCGTACTTTGAGAATATATCCACTGGAGAACATTGCAAGATGTGTAAAACTTGATTCTTCTACGTTAGGTTTCTGGTCCAAGAGCCCAGTGGACGTTGAACCAAGACGAATCAGGCTGCAATCAAATAGTTATACCACAAACACCCTCCTTGACACGTTAACTGCTGCAACTGTGCAGGTCAAGGAGATGGGTGGCATTAGGAGGCCATCTGAATCACTGGGGACAAAGGAGCAACCTTCAGAAAAGAAGAAAGGTATTGCTGATTGGATGAATTTGAGAAAGCCCCCCAATGAAGAGAAAGATCACTGGGTCCCTGATGAGGCAGTCTCAAAGTGTACATCTTGTAGCACTGATTTTGGGGCTTTCATTCGTAAGCATCATTGCAGAAATTGTGGTGATATTTTCTGCGACAAGTGCACTCAGGGAAGAATAGCTCTAACTGCTGATGAAAATTCTTTACCAGTTCGTGTATGTGATCAATGTATGGTATGTATAATGTAA 1407 0.4577 MQQGDYTSVPYYQFPHLRNPYSNSDPINHNPGPSDLHPDRYASAPPFTSDDKTSEYNPYPSSYHPHLLYSVSVPATTSTPPTLASPSAPPYPPTSNTDYKPTFNLTSQSPSFPPFESHPPYPPSSEQQPCQPPFDQHLSSAAGYGPTPSPNPNSTPNPSYSSPPSASYGQPTSSAPPAYGSMYEKPVKFDSSVSYFDDRSGGYNPVRYDLSSDGYSKMSDSGITRYDSGRDNLYGDGPIEVITFHLSLAPPVLELGSEVLGTVFDTRLGFLMSEILNFVGSLELASCQIGLDGIQMLDPSTSRTLRIYPLENIARCVKLDSSTLGFWSKSPVDVEPRRIRLQSNSYTTNTLLDTLTAATVQVKEMGGIRRPSESLGTKEQPSEKKKGIADWMNLRKPPNEEKDHWVPDEAVSKCTSCSTDFGAFIRKHHCRNCGDIFCDKCTQGRIALTADENSLPVRVCDQCMVCIM* 469
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte3g01431 468 PANTHER PROTEIN FREE1 1 235 IPR045893 GO:0036258|GO:0043130
Pte3g01431 468 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 395 468 IPR013083 -
Pte3g01431 468 MobiDBLite consensus disorder prediction 368 402 - -
Pte3g01431 468 Pfam FYVE zinc finger 404 464 IPR000306 GO:0046872
Pte3g01431 468 SUPERFAMILY FYVE/PHD zinc finger 403 466 IPR011011 -
Pte3g01431 468 ProSiteProfiles Zinc finger FYVE/FYVE-related type profile. 408 468 IPR017455 -
Pte3g01431 468 MobiDBLite consensus disorder prediction 376 402 - -
Pte3g01431 468 MobiDBLite consensus disorder prediction 1 179 - -
Pte3g01431 468 MobiDBLite consensus disorder prediction 113 129 - -
Pte3g01431 468 MobiDBLite consensus disorder prediction 97 112 - -
Pte3g01431 468 MobiDBLite consensus disorder prediction 160 177 - -
Pte3g01431 468 FunFam Zinc finger, FYVE-type, endofin 395 468 - -
Pte3g01431 468 SMART fyve_4 400 465 IPR000306 GO:0046872
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte3g01431 Pte-Chr3 12541914 12548135 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte3g01431 388 464 EF-hand Containing Proteins AT3G14270 35.714 3.59e-12 67.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte3g01431 - - qsa:O6P43_018705 435.647
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte3g01431 3 12541914 12548135 Pte3g01431 3 12541914 12548135 RCT