Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte3g01415 ATGGAGGAGAAGTCGAAATCGTGGGGATGTTTTGGTTGGCTTTTGGCCTTGCTTATACTTGCTCTGGTTGTCGGTGCCATTGTCTTCACAGTAAAGAAGAAATCTGGCCACTCCGATAAGCTACCTCCGGTTCCTGGCCCCCCTGGCGCCATTGACCAGAAATATGCCAAAGCTCTCAAAATCGCTATGCAATTCTTCGACGTCCAGAAATCTGGGGAGTTGGTTGACAAAAAGATCTCTTGGAGAGGGGACTCTGCTCTTAAAGACGGAAGTCAAGCAAACTTGGATCTATCCAAAGGAATGTATGATGCAGGGGATCATATGAAATTTGGTTTCCCATTGTCATTTACTGCCACAGTGTTATCTTGGACCATTCTTGAATATGGAGACCAAATGGAAGTGGTTAACCAATTAAAACCAGCTCAAGATTCACTCAAGTGGATCACTGACTACCTTGTCAATGCCCATCCATCTGACAATGTGCTCTATGTTCAGGTAGGTAATCCTGAAGAAGACCACAAATGTTGGGACAGGCCCGAAGACATGACTGAGAAGCGACCTCTCATCCAAGTAAACGTATCTTCTCCTGGATCTGATGTTGCTGCTGAAACTGCTGCAGCAATGGCCTCTGCGTCTTTGGTATTTAAGAAAGTCAACCCTTCATATTCAAGCACACTCCTCAAGCATGCAAAACAGCTGTTTACTTTTGCTGATAAGCACAGAGCTTCTTACTGTGAGAGTATTCCCGATACCAAGAAATATTACAATTCAACAGGATATGGTGATGAGCTCCTATGGGCAGCTAGTTGGCTCTACCATGCAACCGGAGATCAATCATATATTGATTATGTGACTGGAAGTACTGGGAATGACTTTGCCCAATGGGGAAGTCCAACCTGGTTTAGCTGGGACAATAAGCTTGCTGGAGCCCAGGTTTTGTTGTCCAGATTAATCTTCTTCAAAGCGAAAGGAATTTCAGATAATTCAGGGCTTCGAAATTATATGAACACAGCCAGAGCTGTAATGTGTGGTCTCCTCCCTGATTCTCCATCGGCAACAACCAGCAGAACTGAAAATGGTCTCATATGGATTAGTGAATGGAACGCCTTACAACATCCCGTTGCTTCTGCTTTCTTGGCTGTTCTTTTCAGTGACTATATGCTAACTTCCCAGATAGCAAAACTAAAATGTGACGGGAATTTCTTCACCCCAGCTGATCTTCGAAAATTTGCCCAATCTCAAGCGGATTATGTCTTGGGGGACAATCCTATGGGTATGAGTTTTCTTGTGGGCTATGGTGATAAATTCCCGCAGTATGTTCATCATAGAGGAGCATCCATTCCAGAAAATGCAAACACTGGCTGCACTGATGGCTTCCAGTGGCTTGAATCGTCAAAGCCCAATCCCAATGTAGCTATTGGAGCACTCGTTGGTGGACCTTTCCTGAATGAGACTTTCATCGATTCCCGGAACAATTCCATGCAAACTGAACCAAGCACGTATAACAGTGCCGTTTTGGTCGGTCTCCTCTCAAGCTTAGTCACTACCTCATCTGCAGCTGAATCTTTCACCTAA 1575 0.447 MEEKSKSWGCFGWLLALLILALVVGAIVFTVKKKSGHSDKLPPVPGPPGAIDQKYAKALKIAMQFFDVQKSGELVDKKISWRGDSALKDGSQANLDLSKGMYDAGDHMKFGFPLSFTATVLSWTILEYGDQMEVVNQLKPAQDSLKWITDYLVNAHPSDNVLYVQVGNPEEDHKCWDRPEDMTEKRPLIQVNVSSPGSDVAAETAAAMASASLVFKKVNPSYSSTLLKHAKQLFTFADKHRASYCESIPDTKKYYNSTGYGDELLWAASWLYHATGDQSYIDYVTGSTGNDFAQWGSPTWFSWDNKLAGAQVLLSRLIFFKAKGISDNSGLRNYMNTARAVMCGLLPDSPSATTSRTENGLIWISEWNALQHPVASAFLAVLFSDYMLTSQIAKLKCDGNFFTPADLRKFAQSQADYVLGDNPMGMSFLVGYGDKFPQYVHHRGASIPENANTGCTDGFQWLESSKPNPNVAIGALVGGPFLNETFIDSRNNSMQTEPSTYNSAVLVGLLSSLVTTSSAAESFT* 525
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte3g01415 524 ProSitePatterns Glycosyl hydrolases family 9 (GH9) active site signature 2. 417 443 IPR018221 -
Pte3g01415 524 Gene3D - 52 517 IPR012341 GO:0005975
Pte3g01415 524 SUPERFAMILY Six-hairpin glycosidases 53 516 IPR008928 GO:0005975
Pte3g01415 524 Pfam Glycosyl hydrolase family 9 55 510 IPR001701 GO:0004553|GO:0005975
Pte3g01415 524 FunFam Endoglucanase 51 518 - -
Pte3g01415 524 PANTHER ENDO-1,4-BETA-GLUCANASE 17 515 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte3g01415 Pte-Chr3 12382989 12386528 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte3g01415 1 525 Glycoside Hydrolase AT1G75680 70.455 0.0 718
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte3g01415 - - pvy:116141844 855.514
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte3g01415 3 12382989 12386528 Pte3g01415 3 12382989 12386528 RCT