Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte3g01407 ATGTTGAAGTTTCTTTCAAGAGTGAGGATCGAGTTCAATGCCTTAGACCCACGCATAGCATCATGTATGGAATTTCTGGCGCAGTGTAATGCTCGCCAAGCCAAAGAATCCAACCCCTCATGCCAAGTTCTTGTCAAGCGCAGGACTGATGATCATCCCCCACAAATTGCCGTCACTTTCGTTAATGGCGTCGAACAAGTATTCGACGCCACATCCACGCCTGCACAGACAATAAGGAATATGATTCTTGAAAAGGGCCAGCACCTTGAGACCGAGCAGATGTTCCGAGAAGCTGGTGAGGCATGGCCTGTCATTATTCCTGATGTGGAGCTTACCCAACCTTCACCAGGCATCAAGCCCAGGAAAGCAGAAGAGAAGAAACAATAG 387 0.4832 MLKFLSRVRIEFNALDPRIASCMEFLAQCNARQAKESNPSCQVLVKRRTDDHPPQIAVTFVNGVEQVFDATSTPAQTIRNMILEKGQHLETEQMFREAGEAWPVIIPDVELTQPSPGIKPRKAEEKKQ* 129
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte3g01407 128 PANTHER 39S RIBOSOMAL PROTEIN L53, MITOCHONDRIAL 1 128 - -
Pte3g01407 128 Gene3D Glutaredoxin 1 100 - -
Pte3g01407 128 SUPERFAMILY Thioredoxin-like 5 83 IPR036249 -
Pte3g01407 128 Pfam 39S ribosomal protein L53/MRP-L53 12 63 IPR019716 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte3g01407 Pte-Chr3 12282321 12284905 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte3g01407 K17434 - qsa:O6P43_018663 234.187
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte3g01407 3 12282321 12284905 Pte3g01407 3 12282321 12284905 RCT