Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte3g01401 ATGAAGCATAAGACTCCTTCTGCTTCCTTGTCTGTTTTTCTCCTGGTCTTTGCCACCACCGTAACATCTCGCGCTCAGACATCCCCCATCGCCGATGGCGGGGGTCAGTGGCAACTGTTGCAGCAAAACATCGGCATTGTCGGCATGCACATGCAACTCTTACACAACGACCGTGTTGTCATCTATGACCGTACAGATTTCGGCCTATCCAACTTGACTTTGCCTGGTGGGCGCTGTCGCAACGATGACAAGGAGCTACAGGCGAAAGTTGACTGCACTGCCCATTCCATTGAATATGACGTATCTGCCAATAGTGTCCGAGCTCTCTTCGTTCAGACCGACGTGTGGTGCTCTTCTGGTTCAGCTGTTGCAGATGGCCGCCTGATTCAGACCGGTGGTTTCAACGACGGTGATAGTGTGGTCAGGGTGTTCAACCCTTGTACCGACTGTGATTGGCAAGAGCTTGGAGCTCAATTGTCAGCCAGACGATGGTACGCCACCAATCACATCCTACCAGATGGACGCCAGATTATCATCGGAGGGAGAAGACAGTTGAACTACGAGTTTTATCCCAAGGATGCTGTAACCAATAGGGCTTTCACTCTACCATTTCTCGCTCAGACTACTGAACCATACCAAGTCGAGAATAATCTGTACCCTTTTGTGTTCCTCAATGTAGATGGCAACCTGTTTGTATTTGCCAATAACCGGAGTATACTGTTCGACTATGCTCACAACAAGATTATCCGCGAGTATCCAGTAATGCCAGGTGGGGATCCTAGAAACTACCCAAGTACTGGTTCGGCAGTTTTACTGCCACTGAAGAATTTGCAGTCCAAGTCCATTGAAGCTGAGGTTTTGATCTGTGGTGGAGCTCCAAGAGGATCATATCAGAAGTCACTAAACCAGTTTTTCCTTCCGGCATTGGATACATGCGGTCGGATAAAAATAACTGACCCGAATCCGCAATGGGTCATGGAGACAATGCCCGGAGCAAGAGTTATGGGTGACATGATAATTCTACCTAATGGTAATGTCTTGATCATCAATGGAGGATCAGAAGGGACTGCCGGGTGGGAGTCCGGTCGAAGGCCGGCGCTCAGCCCCTTTCTTTATAAACCCGATAAACCTGTTGGGTCTAGGTTCCTTGTCCAGAAAGCTAGCGGCATCCCCCGTATGTACCACTCAACAGCGTTGCTACTCAGAGATGGTAGAGTACTGGTTTCCGGCAGCAACCCGCACGTAGGCTACTCGTTTGGAAATGTTGTATTCCCAACAGAGTTGAGAATGGAAGCGTTTTCTCCATCGTATCTGGAAGCACAGTTTAACAGTGTCCGTCCAAGAATTCTGTCACCGCAATCTCAGTTACACGTCAAGTATGGACAGAGTTTGAAGGTAAGTTTTGTGGTGTCTGGGGCATTGGCTAAGGATTTGGTATTAGTCACAATTTATGCGCCGCCATTTGTCACACACTCGTTCTCGATGAATCAGAGGATGCTGATGTTGGAGACAGGGAATGTGAATAGGTCGGGGAATACATCCACCTATGAAACTGATGTCAACACTCCCAGTACAGCTACTCTTGCCCCACCTGGGTATTATCTTCTCTTTGTGATTCATCAACAAATTCCAAGTGAGGGTATTTGGATACAAATACGTTAA 1662 0.4807 MKHKTPSASLSVFLLVFATTVTSRAQTSPIADGGGQWQLLQQNIGIVGMHMQLLHNDRVVIYDRTDFGLSNLTLPGGRCRNDDKELQAKVDCTAHSIEYDVSANSVRALFVQTDVWCSSGSAVADGRLIQTGGFNDGDSVVRVFNPCTDCDWQELGAQLSARRWYATNHILPDGRQIIIGGRRQLNYEFYPKDAVTNRAFTLPFLAQTTEPYQVENNLYPFVFLNVDGNLFVFANNRSILFDYAHNKIIREYPVMPGGDPRNYPSTGSAVLLPLKNLQSKSIEAEVLICGGAPRGSYQKSLNQFFLPALDTCGRIKITDPNPQWVMETMPGARVMGDMIILPNGNVLIINGGSEGTAGWESGRRPALSPFLYKPDKPVGSRFLVQKASGIPRMYHSTALLLRDGRVLVSGSNPHVGYSFGNVVFPTELRMEAFSPSYLEAQFNSVRPRILSPQSQLHVKYGQSLKVSFVVSGALAKDLVLVTIYAPPFVTHSFSMNQRMLMLETGNVNRSGNTSTYETDVNTPSTATLAPPGYYLLFVIHQQIPSEGIWIQIR* 554
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte3g01401 553 CDD E_set_GO_C 442 552 IPR015202 -
Pte3g01401 553 SUPERFAMILY E set domains 442 552 IPR014756 -
Pte3g01401 553 SUPERFAMILY Galactose oxidase, central domain 97 439 IPR011043 -
Pte3g01401 553 Gene3D Immunoglobulins 445 553 IPR013783 -
Pte3g01401 553 Pfam Glyoxal oxidase N-terminus 49 291 IPR009880 -
Pte3g01401 553 Gene3D - 32 444 IPR037293 -
Pte3g01401 553 PANTHER SECRETED PROTEIN-RELATED 13 552 - -
Pte3g01401 553 Pfam Galactose oxidase-like, Early set domain 446 552 IPR015202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte3g01401 Pte-Chr3 12245401 12247461 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte3g01401 - - qsa:O6P43_018655 797.349
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte3g01401 3 12245401 12247461 Pte3g01401 3 12245401 12247461 RCT