Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte3g01398 ATGAACCGTGTCCGAATTCTGTTGTCAAAATCTTCGCCGGATTCATTGGTTCGCCATTACAAGAACAGACTACTGAGTATGGCGGAAGAGATCAGCAAGACGGAACTTCGATCAACTTCAACTTCAACTGAATCATCGACTTACCAATCCAAACGACGGTGGTCTTCGCTCCTCCGTTGGATTCCGACTTCCACCGACCACATTATTGCTGCCGAGAAGCGCCTTCTTTCTCTTGTCAAGACTCCCTATGTCCAGGAACAAGTTAATATAGGTTCTGGACCGCCAGGGTCAAAAATTAGATGGTTTCGTTCCAAAAGCGACGTGCCAAGGTTCATCAACACTGTCACATTTGACAGCAAACATGATTCTCCTACCCTTGTAATGATTCATGGATATGCTGCTTCTCAAGGATTCTTTTTCCGGAACTTTGATGCTCTCGCCAGTCGCTTCAGGGTCATTGCAATCGATCAACTTGGTTGGGGTGGATCTAGCAGGCCAGATTTTACGTGCAAAAGTACTGAAGAAACGGAAGCATGGTTCATTGATTCTCTCGAGGAATGGCGGAAAGCCAAAAACCTCAGTAACTTTATATTACTAGGACATTCTTTTGGTGGTTATGTTGCTGCTAAATATGCACTTAAGCATCCTGAGCATGTTAAGCACCTGATTTTGGTGGGATCAGCTGGGTTTTCATCAGAATCAGATGCAAACTATGAATTTATTACACGTGTCAGAGCAACATGGAAAGGAGCTATCTTAAACCATCTCTGGGAATCTAATTTTACGCCTCAGAAGCTTATCAGAGGTCTAGGTCCTTGGGGGCCGGGCCTAGTCAGGAGGTATACAAGTGCTAGATTTGGTGCGCATTCAACTGGAGAAATATTAACAGAGGAGGAGTCCGCACTTCTAACAGAGTATGTTTATCATACATTAGCTGCCAAAGGAAGCGGGGAGTTGTGCTTGAAATATATATTTGCATTTGGAGCCTTTGCCCGAATGCCTTTGCTTCGTAGCGCATCAGAGTGGAAAGTACCAACTACTTTCATATATGGTGTCCAGGATTGGATGGATTATAAAGGCGGCCAAAATGCTTGTGAGCTTATGAAAGTGCCTTGTGAAATTATTAGGGTTCCTCGGGGTGGTCACTTTGTGTTCATAGATAACCCGACAGGCTTCCATACTGCTGTTTTTTATGCTTGCCGGCGGTTTCTTTCTCCTGATCCAGATAATGAACCCTTCCCTGAAGGGTTGATCTCCGCATAA 1263 0.4458 MNRVRILLSKSSPDSLVRHYKNRLLSMAEEISKTELRSTSTSTESSTYQSKRRWSSLLRWIPTSTDHIIAAEKRLLSLVKTPYVQEQVNIGSGPPGSKIRWFRSKSDVPRFINTVTFDSKHDSPTLVMIHGYAASQGFFFRNFDALASRFRVIAIDQLGWGGSSRPDFTCKSTEETEAWFIDSLEEWRKAKNLSNFILLGHSFGGYVAAKYALKHPEHVKHLILVGSAGFSSESDANYEFITRVRATWKGAILNHLWESNFTPQKLIRGLGPWGPGLVRRYTSARFGAHSTGEILTEEESALLTEYVYHTLAAKGSGELCLKYIFAFGAFARMPLLRSASEWKVPTTFIYGVQDWMDYKGGQNACELMKVPCEIIRVPRGGHFVFIDNPTGFHTAVFYACRRFLSPDPDNEPFPEGLISA* 421
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte3g01398 420 PRINTS Epoxide hydrolase signature 212 225 IPR000639 GO:0003824
Pte3g01398 420 PRINTS Epoxide hydrolase signature 344 360 IPR000639 GO:0003824
Pte3g01398 420 PRINTS Epoxide hydrolase signature 149 164 IPR000639 GO:0003824
Pte3g01398 420 PRINTS Epoxide hydrolase signature 377 399 IPR000639 GO:0003824
Pte3g01398 420 PRINTS Alpha/beta hydrolase fold signature 198 211 IPR000073 -
Pte3g01398 420 PRINTS Alpha/beta hydrolase fold signature 212 225 IPR000073 -
Pte3g01398 420 PRINTS Alpha/beta hydrolase fold signature 149 164 IPR000073 -
Pte3g01398 420 FunFam Probable 1-acylglycerol-3-phosphate O-acyltransferase 110 400 - -
Pte3g01398 420 Pfam alpha/beta hydrolase fold 124 237 IPR000073 -
Pte3g01398 420 PANTHER RE40534P-RELATED 57 397 - -
Pte3g01398 420 SUPERFAMILY alpha/beta-Hydrolases 120 396 IPR029058 -
Pte3g01398 420 Gene3D alpha/beta hydrolase 111 401 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte3g01398 Pte-Chr3 12199613 12205761 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte3g01398 104 231 Acyl Lipid Metabolism Gene Families AT1G64670 31.618 1.67e-09 57.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte3g01398 - - cpap:110808507 689.878
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte3g01398 3 12199613 12205761 Pte3g01398 3 12199613 12205761 RCT