Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte3g01378 ATGGGGACTCTTGGAAGAGCAATTTACACAGTCGGATTCTGGATTCGTGAGACTGGACAAGCTATAGATCGCCTCGGTTGCCGATTCCAAGGCAACTACTATTTCCAAGAGCACTTGTCTAGGCATCGAACACTTATGAACATATTTGACAAATCTCCTGTGGTTGATAAGGAAGCATTTGTTGCTCCAAGTGCCTCTATAATTGGAGATGTTCAAGTTGGAAGAGGATCATCCATTTGGTATGGCTGTGTTTTGAGAGGTGATGTCAACAACATTAGTGTTGGTTCTGGAACTAACATACAGGACAACTCCCTGGTGCATGTTGCAAAGACTAATCTCAGTGGAAAGGTGTTACCAACTATTATTGGAGACAATGTCACTGTTGGTCATAGTGCTGTACTGCATGGCTGTACTGTTGAGGATGAGGCTTTCGTTGGTATGGGAGCAACACTGCTTGACGGAGTTCTCGTTGAGAAACATGCCATGGTAGCGGCAGGTGCCCTTGTGAGACAGAATACTAGGATTCCTTCAGGGGAGATTGATGGGTTGCATTTGATAGTTGCAGAGTTGCAGAATGCAGATTGA 585 0.4479 MGTLGRAIYTVGFWIRETGQAIDRLGCRFQGNYYFQEHLSRHRTLMNIFDKSPVVDKEAFVAPSASIIGDVQVGRGSSIWYGCVLRGDVNNISVGSGTNIQDNSLVHVAKTNLSGKVLPTIIGDNVTVGHSAVLHGCTVEDEAFVGMGATLLDGVLVEKHAMVAAGALVRQNTRIPSGEIDGLHLIVAELQNAD* 195
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte3g01378 194 CDD LbH_gamma_CA_like 54 180 IPR047324 -
Pte3g01378 194 Gene3D Hexapeptide repeat proteins 43 182 - -
Pte3g01378 194 PANTHER DYNACTIN SUBUNIT P25 10 180 - -
Pte3g01378 194 SUPERFAMILY Trimeric LpxA-like enzymes 46 180 IPR011004 -
Pte3g01378 194 Pfam Hexapeptide repeat of succinyl-transferase 119 151 IPR001451 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte3g01378 Pte-Chr3 12001284 12003610 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte3g01378 K01726 - nnu:104603362 346.665
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte3g01378 3 12001284 12003610 Pte3g01378 3 12001284 12003610 RCT