Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte3g01373 ATGATTTGGAGAACTTTGGTTTCTCAACAAACCTTGAGAAAATTATCACCATCATCCTCTCCGTTCTCCCTTGTCTACAGAAGCATTGCCTTTCTCTCCCCACCTTTGCATCAACGCAAGACTCAGGTCTGTGAAATTGATCAAATTTTTAATCACTCCACGCGCATTTCTTCATCTCATTGTTATGCCCATTCAGTCCAGCACCGCGGCCTCAGCAGCTCAAGTCTGAGGCCAATCCTTGATTCTGAGAATGCAGAAGACGATACGATGAACGATTTCTTATCTAGATTTGTGTGGGTAATGCGTGGGAAGCTCACTGAAGCATACTCTGATTGTGATAAAGAGACAGTTGATGGCATGCTCTTGATCATCGTCGGTAAGGTTGTGTCTGAATTGGAAAAGGGTGGGCTCGAAAAGATGTTTGATGAGGTGGCTGTGGCTCCTTCACAGGATTTTAGTGAGGATTTGTGGAAGACGGTTTGGGAAGTGAGCAATAAGGTGTTGGAGAATATGAATAAGGAGAAGAGGAAGGAGAAAATGAAGCTTTTTTTGCAGTGCGAGCAAGTTAAGGAGATGGTCAGGTTTGCTGGGGAGGTTGGAATTCGTGGAGATTTGTTGCGAGAGCTTAGGTTCAAATGGGCAAAGGAGGAAATGGAAGAGAAAGAGTTCTACGAGAGTTTGGAGCGACTGAAAAAAGAAGAAAGAGTAGAGCAAGAGCAAAAGGCTGAAGCTGAAGAAATCACGGAGTCCGTCGTTGGGGAGAAGTCCAATGTTGTTACACTGCCCACGAGGCATGGGAAGATGAGGTACAAGATATACGGGCTTGATCTCTCCGATCCTAAGTGGGCAGAAGTGGCTGACAAAATACACGATGGAGAACTAAGAACTTGGCCTCAAGAACCGAAGCCAACGTCTGGGAAATGTAAACTTGTTACCGAGAAAATCCTTTCGTTGAACGAGGCAGATGATCCTTCTTCGTTGCTGGCTGAATGGAAGGAGCTTCTTCAACCTACCAGGATTGATTGGATTGCTTTGCTTGATAAAGCTAAAGAGAAGAACTACGGTTTGCACTTAAAGATGTCAGAGATTGCTTTAGATGAAGAGACTTTCCAGACAAGTGCTAACGACTACTCCAAGCTTATTGATACCTATGCTAAAGAAAGACGCCTACATGACGCTGAGAGGATAGTTAACAAGATGAATGAAAATGGCATCCCATCTGATATATTAACGACCCGTGTTTTGGCTCACATGTACAGCGAGGCTGGAAGCATTGAACGTGCGAATGAAGCATTTGAAACCTTAAAAAGGCAAGGGTTTGAGCCTGACATTAAGCTCTATAAGTCAATGATCATGGCATATGTAAATGGTGGTCTACATGCCAAGGGTGAGTATCTTTTGAGAGAAATGACCGCAAGAGATATCAGACCTACAGAGGAAATTTACATGGCACTGCTTAGATCATTTTGTAAACATGGTGACGTTAGTGGAGCTGTGCGAATCTCGAGTTTAATGCACCTTGCTGATCTAAAACCTAGTTTAGAGTGGTGTACATTGTTGGTGGAGGCGAGTTGTATTGCTGGAAATTATTTCGAAGCAAGGACTAACTTTGACTACATTATGAAAATTGGCCTGAAGCCTGATGATAGGTGCACTGCTGCTATGATTGCGGCCTACCGGGACAAAAATGTATTGGACTTGGCCCTGAACCTTCTGTCAGAGCTAGAGAAAATTGGATTCGAGCCTGGTGTTGCTACGTACTCTGTTCTGGTGGACTGGTTGGGTAAGTTGGAACTCTTTGACGAGGTTGAGCAGCTACTTGATAGAATTGCTCAGCTCGGTGAGGCTCCTCCTTTGACGATTCACGTGAGTCTCTGTGACATGTATGCCAGAGCTGGAAATGAGAGAAAGGCCCTCCAAGCCCTTGGAGTTCTGGAGGCGAAAAAGGAGCAGTTGGGACAACAAGAGTTTGAGAGGGTTATACGTGGTCTCGTTGCAGGTAATTTCTTACGGGATGCTCAAAGAATGCATGGTCTAATGGAGGCCCAGGGATTCAGTGCATCAGTGGCAACCAAGACGGAACTGACTACTTCTATTCCCCGCGGTCCCCATCTGAAAACTTTTTTCCAAAGAGGAGCACAAAGACGAGGAGTGAGATAG 2160 0.4495 MIWRTLVSQQTLRKLSPSSSPFSLVYRSIAFLSPPLHQRKTQVCEIDQIFNHSTRISSSHCYAHSVQHRGLSSSSLRPILDSENAEDDTMNDFLSRFVWVMRGKLTEAYSDCDKETVDGMLLIIVGKVVSELEKGGLEKMFDEVAVAPSQDFSEDLWKTVWEVSNKVLENMNKEKRKEKMKLFLQCEQVKEMVRFAGEVGIRGDLLRELRFKWAKEEMEEKEFYESLERLKKEERVEQEQKAEAEEITESVVGEKSNVVTLPTRHGKMRYKIYGLDLSDPKWAEVADKIHDGELRTWPQEPKPTSGKCKLVTEKILSLNEADDPSSLLAEWKELLQPTRIDWIALLDKAKEKNYGLHLKMSEIALDEETFQTSANDYSKLIDTYAKERRLHDAERIVNKMNENGIPSDILTTRVLAHMYSEAGSIERANEAFETLKRQGFEPDIKLYKSMIMAYVNGGLHAKGEYLLREMTARDIRPTEEIYMALLRSFCKHGDVSGAVRISSLMHLADLKPSLEWCTLLVEASCIAGNYFEARTNFDYIMKIGLKPDDRCTAAMIAAYRDKNVLDLALNLLSELEKIGFEPGVATYSVLVDWLGKLELFDEVEQLLDRIAQLGEAPPLTIHVSLCDMYARAGNERKALQALGVLEAKKEQLGQQEFERVIRGLVAGNFLRDAQRMHGLMEAQGFSASVATKTELTTSIPRGPHLKTFFQRGAQRRGVR* 720
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte3g01373 719 Pfam PPR repeat 586 614 IPR002885 -
Pte3g01373 719 Pfam Pentacotripeptide-repeat region of PRORP 369 494 IPR033443 -
Pte3g01373 719 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 478 512 IPR002885 -
Pte3g01373 719 Gene3D Tetratricopeptide repeat domain 372 531 IPR011990 GO:0005515
Pte3g01373 719 Gene3D Tetratricopeptide repeat domain 532 700 IPR011990 GO:0005515
Pte3g01373 719 Coils Coil 227 250 - -
Pte3g01373 719 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 373 407 IPR002885 -
Pte3g01373 719 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 408 442 IPR002885 -
Pte3g01373 719 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 443 477 IPR002885 -
Pte3g01373 719 PANTHER OS07G0661900 PROTEIN 101 692 - -
Pte3g01373 719 NCBIfam pentatricopeptide repeat 377 408 IPR002885 -
Pte3g01373 719 NCBIfam pentatricopeptide repeat 481 513 IPR002885 -
Pte3g01373 719 NCBIfam pentatricopeptide repeat 447 479 IPR002885 -
Pte3g01373 719 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 583 617 IPR002885 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte3g01373 340 696 Glycosyltransferase AT1G05670 23.810 4.64e-27 115
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte3g01373 - - qsa:O6P43_018586 844.343
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte3g01373 3 11977966 11981681 Pte3g01373 3 11977966 11981681 RCT