Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte3g01340 ATGGACGCGCCGTTGCTTCGGAACAGCAGCAGTGATCACGAACTTGAGAAACCTGCTAACTTTGTGAAGGAATTCAGGCTAGAATCAAAGACGTTGTGGAAGCTCGCTGGTCCAGCTATTATGACCGCTGTATGTCAGTACTCAATAGGTGCCCTTACTCAAACATTTGCTGGACAGATTGGAGAGCTCGATCTCGCTGCTGTTTCAGTTGAGAACTCCATTATAGCAGGACTTGCCTTTGGTGTCATGTTGGGAATGGGGAGTGCTTTGGAGACGTTATGCGGGCAAGCATTTGGGGCAGGTCAAATCTCGATGTTAGGGGTGTACATGCAGAGATCTTGGGTTATTTTGTTGGTCACGTCTTGCCTTGTGCTCCCCATCTATATCTGGGCACCTCCCATCTTGATGCTCTTTGGGGAGACGCAGGAAATCTCGAAAGCAGCAGGTAAGTTTGCATTGTGGATGATACCTCAGTTGTTTGCGTATGCGCTCAACTTCCCCATTCAAAAGTTCTTACAAGCACAGGGGAAGGTGATTGTCATGACTTGGGTGTCTGCAGTCGTGTTAATAGTACATGTACTCCTCAGCTGGTTGCTAATATTGAAGTTGGGATGGGGATTGGTTGGAGCAGCAATCACTTTGAACCTATCGTGGTGGCTTATTGTTCTTGGACAACTAGTATATATCTTCATCACCGAATCAGATGGTGCTTGGAGTGGATTCTCGTGGCTGGCATTTTCAGACTTGTTTGGCTTTGTGAAGCTTTCTTTGGCTTCTGCAGTTATGTTATGCTTGGAGTATTGGTATTTGATGCTATTGATAGCAATCGCAGGCCGTCTTAGTAACGCTCTTATAGCAGTCGATGCAATTTCTATCTGCATGAACATTCAGGGCTGGTATGTTATGGTTTCACTGGGATTCAATGCAGCTATAAGCATAAGGGTATCAAATGAACTTGGAGCTGGCAAACCACGTGCTGCAAAATTTTCTGTTCTCGTGGTATCTCTTACCACCATGGTCATAGGTTTCATTGCTATGATCATTGTAATGGCGACGAGGGAGTATTTCCCATTGCTTTTCACCAACAGTGATGCCGTTGCTGCCGAAACGAGGAGACTTGCTATCTTGTTGTCAGTTACTATTCTTCTAAATAGCCTTCAACCTGTACTATCAGGTGTTGCAGTGGGAGCTGGGTGGCAAGCTCTCGTAGCTTACATCAATCTTGGATGCTATTATATAGTTGGATTGCCAGCCGGCATACTTTTGGGATTCACGTTTGATTTAGGAGTCATGGGGATTTGGTCTGGGATGGTCGGCGGCATTTGTTTGCAGACTTTAATCTTGATTGTCATCACTGCAATGACCAACTGGAATAAAGAAGCTGAACAGGCAGAGAGCCGTGTGAAAGAATGGGGTGGATCAATAGCTAGTCATTGA 1437 0.4551 MDAPLLRNSSSDHELEKPANFVKEFRLESKTLWKLAGPAIMTAVCQYSIGALTQTFAGQIGELDLAAVSVENSIIAGLAFGVMLGMGSALETLCGQAFGAGQISMLGVYMQRSWVILLVTSCLVLPIYIWAPPILMLFGETQEISKAAGKFALWMIPQLFAYALNFPIQKFLQAQGKVIVMTWVSAVVLIVHVLLSWLLILKLGWGLVGAAITLNLSWWLIVLGQLVYIFITESDGAWSGFSWLAFSDLFGFVKLSLASAVMLCLEYWYLMLLIAIAGRLSNALIAVDAISICMNIQGWYVMVSLGFNAAISIRVSNELGAGKPRAAKFSVLVVSLTTMVIGFIAMIIVMATREYFPLLFTNSDAVAAETRRLAILLSVTILLNSLQPVLSGVAVGAGWQALVAYINLGCYYIVGLPAGILLGFTFDLGVMGIWSGMVGGICLQTLILIVITAMTNWNKEAEQAESRVKEWGGSIASH* 479
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte3g01340 478 Pfam MatE 38 198 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Pte3g01340 478 Pfam MatE 259 419 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Pte3g01340 478 CDD MATE_eukaryotic 28 463 IPR045069 GO:0042910|GO:1990961
Pte3g01340 478 PANTHER MULTIDRUG RESISTANCE PROTEIN 22 457 - -
Pte3g01340 478 NCBIfam MATE family efflux transporter 38 434 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte3g01340 Pte-Chr3 11533062 11537630 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte3g01340 K03327 - tcc:18591323 744.191
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte3g01340 3 11533062 11537630 Pte3g01340 3 11533062 11537630 RCT