Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte3g01301 ATGGAATATCTGGGGATCGATTTGAGTTGTGCCTTGGGCTCTCTCCGACATGGCAAATTCCCTGACAAAAACTGCTTGCTTCCTCTCATCTCCAAAGTGCTTGGCTATGCCATCGTCGCCGCTTCCACCACCGTCAAACTCCCTCAGATTATGAAAATTCTTAAACATGCAAGTGTCAGGGGTCTTAGCATGGTCTCGTTTGAGCTTGAGGTGGTTGGCTACACTATAGCCTTAGCTTACTGTCTCCACAAAGGGCTTCCTTTCTCAGCTTATGGTGAATTGGTATTTCTCTTGGTCCAAGGTCTCATCCTAGTTGCTTTAATATACTATTACTCTAAACCCGTGGGTGCCATGACATGGATCAGAGCATTACTATATTGCGCTGTTGCACCTACTGTCCTTGCAGGTCAAATTGATCCTCTTCTTTTTGAAGCTCTGTATGCATCACAACATGCAATTTTTCTGTTTGCCAGGATCCCACAGATATGGCAAAACTATTCTGTAAGTCAACCTTTAGATGCTCATCGGAAGCTGTTTTGCCTATTACTGTTTTTTTAA 558 0.4373 MEYLGIDLSCALGSLRHGKFPDKNCLLPLISKVLGYAIVAASTTVKLPQIMKILKHASVRGLSMVSFELEVVGYTIALAYCLHKGLPFSAYGELVFLLVQGLILVALIYYYSKPVGAMTWIRALLYCAVAPTVLAGQIDPLLFEALYASQHAIFLFARIPQIWQNYSVSQPLDAHRKLFCLLLFF* 186
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte3g01301 185 PANTHER MANNOSE-P-DOLICHOL UTILIZATION DEFECT 1 LEC35 -RELATED 6 167 IPR016817 -
Pte3g01301 185 Pfam PQ loop repeat 30 89 IPR006603 -
Pte3g01301 185 Gene3D - 28 113 - -
Pte3g01301 185 SMART ctns 44 75 IPR006603 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte3g01301 Pte-Chr3 11153856 11156427 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte3g01301 1 166 Miscellaneous Gene Families AT4G07390 80.120 4.85e-99 284
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte3g01301 K09660 - gmx:100806764 308.145
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte3g01301 3 11153856 11156427 Pte3g01301 3 11153856 11156427 RCT