Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte3g01260 ATGGCAGAGTCAGAGAAATGGTGCGTTGTGACAGGTGGACGTGGCTTCGCTGCTCGCCATTTGATCGAAATGCTCATCAAGTATGATATGTTCTCTGTAAGAATTGCTGATTTGGCGCCCAACATTCAACTTCAACCTTCTGAGGAGAATGGACTTCTTGATCGAGCTTTAAGCTCTGGTCGTGCTCAGTACATATCTATGGATCTCCGTAATAAAACCCAAGTGCTTAAAGTTTGCGAAGGAGCTGAAGTTGTCTTCCACATGGCTGCTCCCAACTCTTCCATTAATAATTATCAGCTTCATTATTCAGTCAGTGTCGAAGGAACAAAGAATGTCATTGATGCCTGTGTGGAGTGCAATGTGAAGCGCCTTATCTGTACAAGTTCTCCTAGCGTCGTCTTTGATGGTGTTCATGGGATTTTTAATGGGGATGAATCGTTGTCATACCCACCTAAGCATAATGATCATTATTCGGCAACTAAAGCTGAGGGAGAGGCATTAGTTATCAAATCAAATGGTGTTAATGGTCTTTTGACGTGCTGCATTCGTCCTAGCAGCATCTTTGGCCCTGGTGATATGCTGTTGGTTCCTTCTCTGGTTGATGCTGCAAGGGCGGGGAAATCGAAGTTCATCGTTGGTGATGGAAAAAACTTGTATGACTTCACTTATGTCGAAAATGTGGCTCATGCCCACATATGTGCCGAAAGAGCTCTGGCATCAGAAAAGACTGTTGCAGAAAAAGCTGCTGGGCAGGCATATTTCATAACCAATATGGAGCCTATCAAGTTTTGGGAGTTTATATCACTTATTCTGGAAGGTCTGGGATATGAAAGGCCCAGAATAAAGATCCCAGTTTTTGTTATGATGCCTATCGCACATCTGGTGGAGTTGACCTATAAGCTGCTTAGCCCATATGGGATGAAAGTTCCACAGTTGACACCTTCAAGAATAAGGCTTCTTTCCTGTAGCAGAACTTTTAATTGTTCAAAAGCGAAAGACCGACTTGGCTACATGCCCACCATATCCCTTCAGGATGGTATCAAGAGAACAATTGAGTCATACTCACACTTGCGGGCTGAAAACCAATTTAAAATTAAAAGAGAAGGAATTTCTAAAGCTACCAAATGTCTTGGAAATGGAAGAGTTGCAGATACATTACTCTGGCGGGACAAAAAGCAGACAGCCAAGACATTACTGGTTCTGCTCTCTATCTACTACTGCTTTATTGCATCTGGATGCACTGCCATATCTGCAGTTTCGCAACTTCTATTAGCTGCACTGATCTTTTTACTGATAAATAGCTTCTTACCCGAAAAGATATTTGGTTACAGATTTGAGAAGATTTCTGCATCTAGTTTTCACCTCACAGAAGATCAATCTCAGAAGATAGCTCTTTCGGTGGCTTCATCGTGGAACTTTTCGGTAAAGGTCCTAAAATCTATTTCAAAAGGGAAAAACTGGATGCTGTTTCTAAAGGTTCTTTCCTTTCTGTTGGTTCTTAGCTTCCTTGGAGTGTTTTCACTACAGAAATTATACGCCTTTGGTGTTCCGTTGGCTTTCGTCGTTTTCTATGTGTATGAGCAAAAGGAATCAGAAATTGATTCCATTGTTCTGACTGCACGTTCTTTTGGATGCAAATTGAAATCCCAAATTGTCGGAAAATCTCCCGTTCCAACGAAGACCGAGTGA 1689 0.4198 MAESEKWCVVTGGRGFAARHLIEMLIKYDMFSVRIADLAPNIQLQPSEENGLLDRALSSGRAQYISMDLRNKTQVLKVCEGAEVVFHMAAPNSSINNYQLHYSVSVEGTKNVIDACVECNVKRLICTSSPSVVFDGVHGIFNGDESLSYPPKHNDHYSATKAEGEALVIKSNGVNGLLTCCIRPSSIFGPGDMLLVPSLVDAARAGKSKFIVGDGKNLYDFTYVENVAHAHICAERALASEKTVAEKAAGQAYFITNMEPIKFWEFISLILEGLGYERPRIKIPVFVMMPIAHLVELTYKLLSPYGMKVPQLTPSRIRLLSCSRTFNCSKAKDRLGYMPTISLQDGIKRTIESYSHLRAENQFKIKREGISKATKCLGNGRVADTLLWRDKKQTAKTLLVLLSIYYCFIASGCTAISAVSQLLLAALIFLLINSFLPEKIFGYRFEKISASSFHLTEDQSQKIALSVASSWNFSVKVLKSISKGKNWMLFLKVLSFLLVLSFLGVFSLQKLYAFGVPLAFVVFYVYEQKESEIDSIVLTARSFGCKLKSQIVGKSPVPTKTE* 563
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte3g01260 562 Gene3D - 1 358 - -
Pte3g01260 562 ProSiteProfiles Reticulon domain profile. 382 562 IPR003388 -
Pte3g01260 562 FunFam Reticulon-like protein 1 359 - -
Pte3g01260 562 Pfam 3-beta hydroxysteroid dehydrogenase/isomerase family 9 284 IPR002225 GO:0003854|GO:0006694|GO:0016616
Pte3g01260 562 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 6 355 IPR036291 -
Pte3g01260 562 PANTHER BIFUNCTIONAL POLYMYXIN RESISTANCE PROTEIN ARNA 8 354 - -
Pte3g01260 562 Pfam Reticulon 382 537 IPR003388 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte3g01260 Pte-Chr3 10742767 10749709 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte3g01260 9 354 Lipid Metabolism Gene Families AT2G33630 31.781 1.07e-42 157
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte3g01260 K23558 - qsa:O6P43_019160 844.728
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte3g01260 3 10742767 10749709 Pte3g01260 3 10742767 10749709 RCT