Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte3g01258 ATGAGCTTGCCTAAGAAAGAATTGCAATTTACTGATTCAAAGTTAAGCAATGCAAACAAGGGAATGGCATTGAATCCAAATGCTGCAGAATTCATTCCCATTTCCCTCAGATCATCTGCTTCAGGGAGCTCTACCTCATTAGATGCAGCTGCAAGGCTCGCTAGAACTGGAACTTTAGGAAAAGCAGTGCTAGATCGAACAGAATCATCTGCTTCGAATAATTCTGATGATGAGGCTCATCAGTATTGGCGCTGTCAGCTCCCTGATGATATTACCCCAGACTTCAAAGTCATGGGTGAAGAAGAGTCGCAATGTTTTGGTAGTCTCTCTCTGAAAGGCCTGTCTTTGCATGATGACGGTCACTCCTTGGGTTATCCTCCATCCAAGGGAAGTGGATTTCTGTTGAACGAGCACCAAGAGTTATCTCAGAAGCACGTAAATATCGGTAACCTTGCTGATAAGTTGAGAATTTCAGGTTCCAACTATGGGGAAGACCTCTTTGCAAATTTCTTGCACATGTCAACGGAGTCTTGGGATAAGCAAATTGGGAATGGTAACCAGCTTGCCAGTGATGGACTCCCCTATGATTCAAGACTTGGATTTATAAATGATATGTTAGGAAATAGTGCAACAATGAATGAGACAGACATCAACCCGTTGGAGTTTTTAGCATCTCAGTTCCCTGGTTTTGCTGCTGACAGCCTGACAGAAGTATATTTTGCCAATGGGTGTGACTTAAATCTAACCATTGAGATGCTCACACAGTTAGAGCTACAAGTGGATAGTAATTTCAATCAGTCTCTAAACACAACTACTGTATCTGCCCCCAATCTCAATGGAATGGATTTCCCGGCACTTGGCACGCCCAATGGGCATAACAGAACTACAAAATATGCAGATGATTTTCAGCCAAGCAATTGTTCTTATCAATCATCAGAGAAGAACAGCATGTTCTTTAAATCTTCCAATTCCTTCCCTTCTAGAGGGTCTGCAGATTTTGCTTCAGCTGTCAGGAAATTAGCATCTCAGGATTCTGGTATCTGGAAGTATGAGAAGAATGGTTCTGCTGATACTGCCACTGGCTCAAGTAGAAGCTCCCATGTTCTGGCTAATAGTTACACCAGTGGGCATGGAAGAGGCATGTACAGTGACAGGTTGCAGAATCGTGGTTCATTGAAAGTACCGCCAGTTTGGCTTGAAACTGGCGATGCAGTTGCAAATTTATATTCCGAGATGCGGGAGGAGGCTCGTGACCATGCACGCCTACGGAATGCATACTTTGAGCAGGCACGTCAAGCTTATCTTGTTGGCAACAAGGCTTTAGCTAAGGAACTAAGTGCTAAAGGTCAGCTGCATAATATGCATATGAAGGCAGCACATGGAAAGGCTCAAGAGTCAATTTACCGGCAGAGGAATTCCGCAATTGCTACAGAAGTGCAAGGAAGTGGAAGAGGGGAGAGGATGATAGACTTGCACGGCTTGCATGGAACTGAAGCCATCCATGTGCTGAAAAATGAACTGAGTGTGCTGAGAAGTGCTGCCAGGACAGCAGGGCAGCGATTGCAGGTTTACATTTGCGTGGGTACAGGCCACCACACGCGGGGTTCCCGTACGCCAGCAAGACTTCCAATTGCTGTACAGCGTTATTTGCTTGAAGAAGGCCTGGAGTACTCGGAACCACAGGCTGGCCTGCTTCGTGTTGTGATATATTGA 1713 0.4518 MSLPKKELQFTDSKLSNANKGMALNPNAAEFIPISLRSSASGSSTSLDAAARLARTGTLGKAVLDRTESSASNNSDDEAHQYWRCQLPDDITPDFKVMGEEESQCFGSLSLKGLSLHDDGHSLGYPPSKGSGFLLNEHQELSQKHVNIGNLADKLRISGSNYGEDLFANFLHMSTESWDKQIGNGNQLASDGLPYDSRLGFINDMLGNSATMNETDINPLEFLASQFPGFAADSLTEVYFANGCDLNLTIEMLTQLELQVDSNFNQSLNTTTVSAPNLNGMDFPALGTPNGHNRTTKYADDFQPSNCSYQSSEKNSMFFKSSNSFPSRGSADFASAVRKLASQDSGIWKYEKNGSADTATGSSRSSHVLANSYTSGHGRGMYSDRLQNRGSLKVPPVWLETGDAVANLYSEMREEARDHARLRNAYFEQARQAYLVGNKALAKELSAKGQLHNMHMKAAHGKAQESIYRQRNSAIATEVQGSGRGERMIDLHGLHGTEAIHVLKNELSVLRSAARTAGQRLQVYICVGTGHHTRGSRTPARLPIAVQRYLLEEGLEYSEPQAGLLRVVIY* 571
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte3g01258 570 PANTHER POLYADENYLATE-BINDING PROTEIN-INTERACTING PROTEIN 7 1 570 - -
Pte3g01258 570 Gene3D - 456 569 IPR036063 -
Pte3g01258 570 SMART SMR_2 486 570 IPR002625 -
Pte3g01258 570 Pfam Domain of unknown function (DUF1771) 409 472 IPR013899 -
Pte3g01258 570 CDD CUE_CID7_like 217 259 IPR041806 -
Pte3g01258 570 ProSiteProfiles Smr domain profile. 489 570 IPR002625 -
Pte3g01258 570 SMART DUF1771_2 408 473 IPR013899 -
Pte3g01258 570 SUPERFAMILY SMR domain-like 487 568 IPR036063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte3g01258 Pte-Chr3 10729875 10733344 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte3g01258 - - mnt:21401589 781.556
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte3g01258 3 10729875 10733344 Pte3g01258 3 10729875 10733344 RCT
Pte3g01258 3 10729875 10733344 Pte2g01107 2 12023819 12029165 RCT