Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte3g01250 ATGATAGCTCAGAGCTCACGGTGGTCGGAAGGAGAGAGTAGTTCGAGTGCTTTTGTTCTCGTGGATGTAAACCGAAGTAGCGCCGATGAAACTCGCGATTCTCACAATAAGCGTGCCAAAGTTGAGTCTGAGCCCGATGAGTGCCGTTATTTGTCTGTAATGAGTTCAAGTGCTGTGAGTTTGAATGCATCTACTGACGTAAACTACAGCAATATTCAATGCACACCTGTTCAATCTAAAAATGAGATGTATTATGACGGTTCTGTGATTGTTGGCTCTGGTGATTATAAACCTCCTGATCACAAGATATCAAAATATGAAGACAAAAAGGAATTTTCAAAATTAGAAGATCATGAAGTTAGAATGGATCTGACAGATGATCTACTGCACATGGTTTTCTCTTTTTTGGATCACCACATGCTCTGCCATGCTGCTAGCGTCTGCAGACAATGGCGATCAGCCAGTTCTCATGAAGATTTTTGGAGGTATCTAAATCTCAAGGATAGTAAAATATCCATGGAACAATTTGAGGATGTGTGTCAGCGCTACCCTACTGTCTCAAAAATAAATTTGTCTGGCGTGAATTCTGAATTACCTAGTTTGCCATCTGTTCATTCACTCGCTATGAAAGCTGTACAATCATTAAGAAATATAAAAAATTTGACCCTTGGAAGAGGAGGGCAACTTGGGGATTCATTTTTTCAGGCCTTGTCAGATTGTGCTGCTCTGAATAGATTGAATATCAATGATGCTACTCTTGGTAATGGTATTCAGGAGATACCCATCAATCATGACAGATTGGTTCACCTGCAACTTAGAAAGTGTCGTGTCATGCGGATTTCTGTCAGGTGCCCCCAGCTCGAGACAATGTCCTTGAAGCGCAGTAACATGGCACAAGCTGTACTTTTTTGCCCTCTTATGCAGGAGCTTAACATAGGCTCTTGTCATAAGCTTCCAGATGCTGCAATTCGTTTAGCTGCAACCTCGTGCCCACAGTTAGTAAATCTGGACATGTCAAATTGTTTGTGTGTTAGTGATGAAACACTACGAGAAATAGCCCTTTCCTGTGTTAATCTCCGTTTTCTCGATGCATCATATTGCCCAAACATCTCACTGGAGTCTGTGAGACTGCCTATGCTGACAGTTCTGAAGCTCCATAATTGTGAGGGTATCACTTCAGCTTCAATGGCAGCAATATCTTATAGTAATTTGTTAGAGGTTTTGGAGCTTGACAATTGCAGCTTACTATCTTCAGTGTCCTTGGAGCTACCGTGTTTGCAGAATATTAGATTAGTACATTGTAGGAAATTTGCTGATTTCAATTTAAGGAGTATTATGTTATCTTCTATACTGGTATCCAATTGCCCTGCGCTCCATCACATCAACATCACTTCAAATTCACTGCAAAAACTAGTGTTGCCGAAGCAGGATAGTTTAACAACTCTAGCTTTGCAATGCCAAAGTTTACAAGAAGTGGATCTCAGTGATTGTGAATCCCTTTCAAATTCTATTTGTGATGTCTTCAGTGATGGTGGTGGATGCCCCATGTTAAGGTCATTAGTTCTTGATAATTGTGAGAGCTTGACAGCAGTGCGATTCTTTAGTACTACTTTGGCCAGTCTCTCCCTTGTTAGTTGCCGGGCTATTACGGCTATTGAGCTCACTTGCCCTAATCTGGAGAAAGTTTGTTTAGATGGTTGCGATCATCTTGAAACTGCAGCCTTTTCTCCTGTGGGTCTGCGGTCCCTAAATCTGGGAATATGTCCGAAATTGAATCAACTGGCCATTGAAGCACCCCAAATGGTCTCACTTGAGTTGAAAGGTTGTGGGGTATTATTTGATGCTTCAATCTATTGTCCACTCCTGACATCTCTTGACACTTCTTTTTGCAGCCAACTCACTGATGAATGCTTGTCTGCAACGGCAGCTTCCTGTCAGCAAATTGAAGCACTAGTATTAATGTCTTGTCCATCGATTGGTTCAGTTGGACTTTGTTCTTTGCGTTGGTTGCCAAGTTTGACTGTGCTTGACCTGTCATATACTTTCTTGACAAGCTTACAACCTGTTTTTGAGTCTTGTTTGCAACTGAAGGTATTGAAATTACAAGCATGCAAGTATCTCACTGATACATCACTTGAGCCCTTATACAAGGGAGGTGCTCTGCCTGCTCTCCAGGAGTTGGATTTATCCTATGGAACTTTGTGCCAAACAGCCATAGAAGAGCTTCTTACTCGCTGCACACACCTCACACACCTTAGCTTGAATGGCTGTGTAAATATGCATGACTTGAATTGGGGTTCAACTGGTGTTCAGCTTTCTGACCTTCCTAACAGTTACCTCTCATCTGGACTATTTGAGAATATCTTGGAGGCAAGTCAGCAACCCAATCGTTTACTGCAAAACCTCAACTGTGTAGGATGCCCAAATATTAAAAAAGTTCTCATCCCACCAATGGCTCGATGTTCGCACTTATCATCCTTGAACATTTCTTTATCAGCACATTTAAAAGAAGTTAATGTTGCTTGTTTCAACCTCTGCTTCCTCAATTTGAGCAATTGCTGTTCATTGGAAATATTGAAGCTAGAATGCCCAAGATTATCTAGTTTGTTCCTTCAGTCATGCACCATTGATGAGGAAGCCGTTGAAGCTGCCATTTCAAAATGCAGCATGCTGGAGACTTTGGATGTTCGCTTCTGTCCAAAGATGTCCTCAGCGAGCATGGGAAGATTTCGAGCAGCATGCCCCAGTTTAAAGCCAATATTTAGCAGCTTGTCAACTTGGTGA 2784 0.4181 MIAQSSRWSEGESSSSAFVLVDVNRSSADETRDSHNKRAKVESEPDECRYLSVMSSSAVSLNASTDVNYSNIQCTPVQSKNEMYYDGSVIVGSGDYKPPDHKISKYEDKKEFSKLEDHEVRMDLTDDLLHMVFSFLDHHMLCHAASVCRQWRSASSHEDFWRYLNLKDSKISMEQFEDVCQRYPTVSKINLSGVNSELPSLPSVHSLAMKAVQSLRNIKNLTLGRGGQLGDSFFQALSDCAALNRLNINDATLGNGIQEIPINHDRLVHLQLRKCRVMRISVRCPQLETMSLKRSNMAQAVLFCPLMQELNIGSCHKLPDAAIRLAATSCPQLVNLDMSNCLCVSDETLREIALSCVNLRFLDASYCPNISLESVRLPMLTVLKLHNCEGITSASMAAISYSNLLEVLELDNCSLLSSVSLELPCLQNIRLVHCRKFADFNLRSIMLSSILVSNCPALHHINITSNSLQKLVLPKQDSLTTLALQCQSLQEVDLSDCESLSNSICDVFSDGGGCPMLRSLVLDNCESLTAVRFFSTTLASLSLVSCRAITAIELTCPNLEKVCLDGCDHLETAAFSPVGLRSLNLGICPKLNQLAIEAPQMVSLELKGCGVLFDASIYCPLLTSLDTSFCSQLTDECLSATAASCQQIEALVLMSCPSIGSVGLCSLRWLPSLTVLDLSYTFLTSLQPVFESCLQLKVLKLQACKYLTDTSLEPLYKGGALPALQELDLSYGTLCQTAIEELLTRCTHLTHLSLNGCVNMHDLNWGSTGVQLSDLPNSYLSSGLFENILEASQQPNRLLQNLNCVGCPNIKKVLIPPMARCSHLSSLNISLSAHLKEVNVACFNLCFLNLSNCCSLEILKLECPRLSSLFLQSCTIDEEAVEAAISKCSMLETLDVRFCPKMSSASMGRFRAACPSLKPIFSSLSTW* 928
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte3g01250 927 Gene3D Ribonuclease Inhibitor 119 444 IPR032675 -
Pte3g01250 927 Gene3D Ribonuclease Inhibitor 768 923 IPR032675 -
Pte3g01250 927 SUPERFAMILY L domain-like 614 919 - -
Pte3g01250 927 SUPERFAMILY RNI-like 479 712 - -
Pte3g01250 927 MobiDBLite consensus disorder prediction 26 43 - -
Pte3g01250 927 MobiDBLite consensus disorder prediction 23 43 - -
Pte3g01250 927 Pfam F-box-like 126 166 IPR001810 GO:0005515
Pte3g01250 927 CDD F-box_FBXO41 126 165 - -
Pte3g01250 927 Gene3D Ribonuclease Inhibitor 445 592 IPR032675 -
Pte3g01250 927 SMART LRR_CC_2 423 448 IPR006553 -
Pte3g01250 927 SMART LRR_CC_2 486 510 IPR006553 -
Pte3g01250 927 SMART LRR_CC_2 215 240 IPR006553 -
Pte3g01250 927 SMART LRR_CC_2 304 329 IPR006553 -
Pte3g01250 927 SMART LRR_CC_2 514 544 IPR006553 -
Pte3g01250 927 SMART LRR_CC_2 888 913 IPR006553 -
Pte3g01250 927 SMART LRR_CC_2 619 644 IPR006553 -
Pte3g01250 927 SMART LRR_CC_2 377 402 IPR006553 -
Pte3g01250 927 SMART LRR_CC_2 330 355 IPR006553 -
Pte3g01250 927 SMART LRR_CC_2 863 887 IPR006553 -
Pte3g01250 927 SMART LRR_CC_2 746 775 IPR006553 -
Pte3g01250 927 SMART LRR_CC_2 556 586 IPR006553 -
Pte3g01250 927 SMART LRR_CC_2 645 670 IPR006553 -
Pte3g01250 927 SMART LRR_CC_2 693 718 IPR006553 -
Pte3g01250 927 Gene3D Ribonuclease Inhibitor 686 767 IPR032675 -
Pte3g01250 927 Gene3D Ribonuclease Inhibitor 593 685 IPR032675 -
Pte3g01250 927 FunFam F-box/LRR-repeat protein 15 686 771 - -
Pte3g01250 927 FunFam F-box/LRR-repeat protein 15 116 374 - -
Pte3g01250 927 PANTHER OS10G0396666 PROTEIN 114 926 - -
Pte3g01250 927 SUPERFAMILY RNI-like 376 528 - -
Pte3g01250 927 FunFam F-box/LRR-repeat protein 15 isoform C 778 923 - -
Pte3g01250 927 SUPERFAMILY RNI-like 141 372 - -
Pte3g01250 927 SMART fbox_2 124 164 IPR001810 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte3g01250 Pte-Chr3 10662289 10668707 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte3g01250 - - qsa:O6P43_019140 1332.01
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte3g01250 3 10662289 10668707 Pte3g01250 3 10662289 10668707 RCT