Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte3g01248 ATGGGGGAGGCTGCAGAGATCTTCTTTGTCAATGGGTTCTCAAAAGTTGGCCATGAAAATGAGCAGAATGGCAACACCAACATCAACAGCACCCATGAGAATAGCCATCTTGGCGACTCTTGGTATGAAGAAATCATCGATGATGATCTCAAATGGTCTTTTGCGTTGAACAGAGTGCTGTATAAAGGGACCAGCGAATTCCAGGAGATAGCTCTACTGGATACAAAACGATTTGGAAAGGCATTGATGATTGATGGGAAGATGCAGAGCGCTGAAAAGGACGAATTCATTTATCACGAATGCTTGATTCATCCTCCTCTCTTATGTCACCCCAATCCCAAAACGGTTTTTATAATGGGGGGTGGCGAAGGATCTGCAGCTAGGGAAGTTCTTAAGCACAAGTCAATAGACAGACTGATTATGTGTGACATCGACCAGGAAGTTGTAGATTTCTGTCGTCGATATTTGACAGAAAACCAGGAGGCCTTCTCCCACAAGAAGCTACACCTTGTCATCAATGATGCCAAGGATGAATTGAACAAGAGAAACGAGAAATTCGACATCATTGTCGGAGACCTGGCAGACCCAGTTGAAGATGGCCCTTGCTATCAACTCTATACCAAGTCATTTTATGAGAAGATTCTCAAGCCCAAGCTCAATGAGAATGGCATTTTTGTCACTCAGGCTGGACCTGCTGGCATCTTCACACACAAGGAAGTCTTCACCTCTATACACAACACGCTCAAACAAGTGTTCAAATATGTATTGGCATACACAAGTCACATACCATCCTTTGCTGATACCTGGGGATGGGTCATGGCCTCAGACCAACCATTATGCATCAATACTAGTGAAATGGACAAGAGGATCGAATCAAGATTAGATGGGGAATTGCTGTATCTGACTGGTTCCTGGTTCCTCTCATCAACCACCATGAACAAGGCTATCTCTCAAGCGCTGCAGAATGAAACTCATGTGTACACCGAAGAAAATGCTAGATTTATCCATGGACATGGTGTTGCTCACCGGTTCCAAGAGTTCCAAGTATTCGACAACGGGCATGCTGAGAAACATCTATACACAGCTTAA 1089 0.4417 MGEAAEIFFVNGFSKVGHENEQNGNTNINSTHENSHLGDSWYEEIIDDDLKWSFALNRVLYKGTSEFQEIALLDTKRFGKALMIDGKMQSAEKDEFIYHECLIHPPLLCHPNPKTVFIMGGGEGSAAREVLKHKSIDRLIMCDIDQEVVDFCRRYLTENQEAFSHKKLHLVINDAKDELNKRNEKFDIIVGDLADPVEDGPCYQLYTKSFYEKILKPKLNENGIFVTQAGPAGIFTHKEVFTSIHNTLKQVFKYVLAYTSHIPSFADTWGWVMASDQPLCINTSEMDKRIESRLDGELLYLTGSWFLSSTTMNKAISQALQNETHVYTEENARFIHGHGVAHRFQEFQVFDNGHAEKHLYTA* 363
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte3g01248 362 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 38 321 IPR029063 -
Pte3g01248 362 Hamap Polyamine aminopropyltransferase [speE]. 40 321 IPR001045 GO:0003824
Pte3g01248 362 NCBIfam fused MFS/spermidine synthase 112 266 - -
Pte3g01248 362 FunFam Polyamine aminopropyltransferase 92 339 - -
Pte3g01248 362 Pfam Spermidine synthase tetramerisation domain 41 92 IPR035246 -
Pte3g01248 362 Gene3D Spermidine synthase, tetramerisation domain 39 91 IPR037163 -
Pte3g01248 362 PANTHER THERMOSPERMINE SYNTHASE ACAULIS5 20 331 - -
Pte3g01248 362 CDD AdoMet_MTases 120 228 - -
Pte3g01248 362 Pfam Spermine/spermidine synthase domain 95 276 - -
Pte3g01248 362 Gene3D Vaccinia Virus protein VP39 92 345 IPR029063 -
Pte3g01248 362 ProSiteProfiles Polyamine biosynthesis (PABS) domain profile. 39 276 IPR030374 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte3g01248 Pte-Chr3 10644535 10647488 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte3g01248 K18787 - qsa:O6P43_015848 570.852
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte3g01248 3 10644535 10647488 Pte3g01248 3 10644535 10647488 RCT