Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte3g01201 ATGGAGAAGCCGCAAGAGGAAAATGCAGTTTGCAACCCGGAGATTCTGATTAAAATCTCAGACAACTCAACTGGTATCGTGGATACTAATATTGTAACTAACCATGACTTCTCTGGAGGCTTGGACTCCTGGTACCCCAATAGCTGCGAGGGTTATGTTTCAGCAGAACCGGGTGCTCTGCAAGGATTCTTGAAGTCTGGCGATAGGTATGCTGTTGTCTCAAAGCGTACGAAATGCTGGCAAGGCCTAGAGCAAGATATCACTAGTAAAATCTGTCCAGGTTCCACTTACGTTGTCTCTGCTTTTGTTGGAGTATCTGGGCCTATCCAGCAATCAGCTGAAGTTCTTGCGACATTAAGACTAGAGGATCACAATTCTAAGACCACTCACGTGTTAATTGGAAAAGCTGCAGTCGTGCAGAACAAGTGGGAAAGGTTAGAAGGCACATTTTCATTATCCAATATTCCTGATCGGGTTATCTTTTATTTGGAAGGACCTGCTCCTGGAATTGATCTGCTTATTCAATCAGTTGTGATCACTTGTTCCACTCGAAGTGAATTAAGCACAAGCATGAGAATCATTTCAGCAGAAGATGACGACATCATCGTCAATCCTAATTTTGAGGATGGCTTGAGTAATTGGTCTGGAAGAGGCTGTAAAGTTGTGGTACATGACTCCATGGGTGATGGGAAAATTGTCCCTCTGTCTGGAAAGTTCTTTGCAGCTGCAACAGAACGTACGCAGTACTGGAATGGCATACAGCAGGAGATAACTGGAAGAGTCCAGCGCAAGGTTGCTTATGAGGTCACTGCTGTTGTACGGATATATGGTAACAATGTCACTAGCAGTGATGTGCGCGCTACTTTGTGGATACAAAATCCAGATCTTAGAGAACAGTATATAGGCGTTGCCAATGTGCAGGCAACAGACAAAGATTGGGTACAATTGCGGGGCAAGTTTCTGCTAAATGGCTCCCCGTCAAAGGTCGTGATCTATTTAGAAGGACCTCCTCCTGGGACTGACATCCTTGTAAATAGTTTGATTGTGAAGCATGCAGAGAAGACTCCTCCTTCGACTCCACCAGATATTGAGAACGTGGCTTTTGGAGTAAATATAGTTCAAAACAGCAATCTAACCGACGGTACCAATTCATGGTTTCCCCTTGGCAATTGCACGTTAACTGTTGGAACTGGCTCACCACGTATACTTCCTCCGATGGCAAGAGATTCCCTGGGGACTTACGAATCATTAAGTGGCCGCTACATCCTTATAACAAACCGCACGCAAACTTGGATGGGCCCTGCTCAGATGATCACTGATAATTTGAAACTCTTCTTGACTTATCAAGTTGCTGCGTGGGTAAAGATTGGATCAGGAGCAAGTGGTCCTCAAAATATAAATCTTGCTTTGAGTGTGGATAACCAGTGGGTTAATGGAGGACAGGTTGAAATCGGTGATGATGATAGATGGCACGAACTTGGTGGATCCTTCAGAATTGAGAAGCAACCTTCGAACGTTATGGTTTATGTGCAGGGTCCATCTTCAGGTGTAGATTTTATGATTGCGGGGCTTCAAATTTTTCCCGTTGACAGACGAACAAGGTTCAAACATTTGAGAAGACAGGCGGACAAGATCCGCAAGCGTGATATTGTGCTTAAATTCTCGGGGTTGGATTCTAATAGTTTTGTTGGAACCTTCGTGAAAGTCAGACAAACAAAGACTGGCTTCCCCTTTGGCTCATGTATCAACAGAACAAACATCGACAATGAAGACTTCGTCGATTTTTTCGTGAAAAACTTTAACTGGGGTGTCTTTGGTAATGAGTTGAAGTGGTATTGGACGGAGCCGCAACAAGGGAACTTCAACTACAAAGATGCTGATGACATGTTAGCCTTATGTCAGAAGTACAACATAGACACTCGTGGACATTGTATCTTCTGGGAACAGGAAGGTTCAGTTCAGCAATGGATCAAATCTCTGGATAAAAATGACTTGATGGCAGCTGTGCAAGACCGAGTGACGGGGCTTCTTACACGGTACAAGGGAAAATTCAAGCACTACGATGTTAACAACGAGATGCTGCATGGCTCATTTTACCAAGATAGACTAGGAAAAGACATCCGCGCTAACATGTTCAAAACTGCACACCAATTAGATCCTTCTGCCACACTGTTCGTGAATGAATATCATGTTGAGGATGGATGTGACCCCAGATCGTCTCCAGAGAAATACATTGAACAAATTCTTGATCTTCAAAAAGAAGGTGCTCCTGTTGGAGGGATTGGAATTCAAGGTCACATAGATAGTCCAGTGGGACCTATAGTTTGTTCTGCTCTCGACAAGTTAGGTATACTCGGTCTTCCAATATGGTTCACCGAGCTAGATGTATCTTCTATTAATGAATATGTAAGGGCAGATGACTTGGAAGTCATGCTCAGGGAAGCTTTTGCTCACCCTGCAGTAGATGGTGTAATGCTGTGGGGATATTGGGAGTTATTTATGAGCAGAGAAAATTGTCATCTAGTGGACGCAGAAGGTGAAATCAATGAAGCAGGTAAGAGGTTCCTTACTCTTAAACAAGAATGGTTGTCTCATTCCCATGGTCATGTTGATGAGAACGGGGAATTTAGATTTAGAGGTTTCCATGGGACATATGAAGTTGAAATCCTGAGTTTGTCTAAGAAGGTCTCCAAGACATTTGTTGTTGACAAAGGTGACAACCCCCTTGTTGTGTCCATAGATTTGACATAA 2751 0.4355 MEKPQEENAVCNPEILIKISDNSTGIVDTNIVTNHDFSGGLDSWYPNSCEGYVSAEPGALQGFLKSGDRYAVVSKRTKCWQGLEQDITSKICPGSTYVVSAFVGVSGPIQQSAEVLATLRLEDHNSKTTHVLIGKAAVVQNKWERLEGTFSLSNIPDRVIFYLEGPAPGIDLLIQSVVITCSTRSELSTSMRIISAEDDDIIVNPNFEDGLSNWSGRGCKVVVHDSMGDGKIVPLSGKFFAAATERTQYWNGIQQEITGRVQRKVAYEVTAVVRIYGNNVTSSDVRATLWIQNPDLREQYIGVANVQATDKDWVQLRGKFLLNGSPSKVVIYLEGPPPGTDILVNSLIVKHAEKTPPSTPPDIENVAFGVNIVQNSNLTDGTNSWFPLGNCTLTVGTGSPRILPPMARDSLGTYESLSGRYILITNRTQTWMGPAQMITDNLKLFLTYQVAAWVKIGSGASGPQNINLALSVDNQWVNGGQVEIGDDDRWHELGGSFRIEKQPSNVMVYVQGPSSGVDFMIAGLQIFPVDRRTRFKHLRRQADKIRKRDIVLKFSGLDSNSFVGTFVKVRQTKTGFPFGSCINRTNIDNEDFVDFFVKNFNWGVFGNELKWYWTEPQQGNFNYKDADDMLALCQKYNIDTRGHCIFWEQEGSVQQWIKSLDKNDLMAAVQDRVTGLLTRYKGKFKHYDVNNEMLHGSFYQDRLGKDIRANMFKTAHQLDPSATLFVNEYHVEDGCDPRSSPEKYIEQILDLQKEGAPVGGIGIQGHIDSPVGPIVCSALDKLGILGLPIWFTELDVSSINEYVRADDLEVMLREAFAHPAVDGVMLWGYWELFMSRENCHLVDAEGEINEAGKRFLTLKQEWLSHSHGHVDENGEFRFRGFHGTYEVEILSLSKKVSKTFVVDKGDNPLVVSIDLT* 917
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte3g01201 916 Gene3D - 27 181 - -
Pte3g01201 916 Gene3D - 367 527 - -
Pte3g01201 916 Gene3D - 193 352 - -
Pte3g01201 916 ProSiteProfiles Glycosyl hydrolases family 10 (GH10) domain profile. 571 858 IPR001000 GO:0004553|GO:0005975
Pte3g01201 916 SUPERFAMILY Galactose-binding domain-like 198 354 IPR008979 -
Pte3g01201 916 SUPERFAMILY Galactose-binding domain-like 28 182 IPR008979 -
Pte3g01201 916 SUPERFAMILY Galactose-binding domain-like 369 530 IPR008979 -
Pte3g01201 916 FunFam Glycosyl hydrolase family 10 protein 195 351 - -
Pte3g01201 916 SMART glyco_10 609 859 IPR001000 GO:0004553|GO:0005975
Pte3g01201 916 SUPERFAMILY (Trans)glycosidases 564 866 IPR017853 -
Pte3g01201 916 FunFam Endo-1,4-beta-xylanase A 564 866 - -
Pte3g01201 916 Pfam Glycosyl hydrolase family 10 573 829 IPR001000 GO:0004553|GO:0005975
Pte3g01201 916 Pfam Carbohydrate binding domain 30 168 IPR003305 GO:0016798
Pte3g01201 916 Pfam Carbohydrate binding domain 200 336 IPR003305 GO:0016798
Pte3g01201 916 Pfam Carbohydrate binding domain 371 515 IPR003305 GO:0016798
Pte3g01201 916 Gene3D Glycosidases 563 870 - -
Pte3g01201 916 PANTHER GLYCOSYL HYDROLASE 356 907 IPR044846 GO:0004553|GO:0005975
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte3g01201 Pte-Chr3 10301138 10305661 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte3g01201 29 915 Glycoside Hydrolase AT1G58370 70.325 0.0 1335
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte3g01201 - - qsa:O6P43_019064 1467.98
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte3g01201 3 10301138 10305661 Pte3g01201 3 10301138 10305661 RCT