Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte3g01197 ATGATTCAACGAAGCCTGTGCTCTCGAAGCCTGGGTCAATCGCTTCTTCGATCCGCTTCTTCATCACAGAAGGGAGGTGCTTCCGTTGGTTTTTCATCTCAGGCTTCTTCCTCTCTGCAGCCACTACCTGAATCACCAACATACAGCGATGACGAGAATTCTGAGGTGGACTGGGACAATCTTGGATTTGGACTCATTCCAACTGATTACATGTACTTGAACAAATGTTCTCAAGGCAACAAATTTGGTGGAGGACAGCTGAGTCGCTATGGAAACATTGAGTTGAGCCCATCAGCTGGGGTTATAAACTATGGCCAGGGATTGTTTGAAGGAACAAAAGCATATAGAAAACCAAATGGCAAACTCCTTCTCTTTCGTCCTGAACAAAATGCAATTCGAATGAAAATTGGATCTGAAAGAATGTGCATGCCATGCCCCTCAGTCCATAACTTTGTGGATGCATTGAAACAAACTGCTTTAGCTAATAAGCGATGGGTTCCTCCTCCAGAGAAAGGGGCGTTGTACCTAAGGCCTCTGCTTATAGGAACAGGACCCATACTTGGTTTGGCCCCTGCGTCTGAATACACTTTTCTAATATATGCTTCCCCTGTAGGCAATTATTTTAAGGGGGGCTCTGCACCCTTGAATCTGTATGTGGAGGATGAGTTTGACCGTGCCGCTCCCCGTGGAACTGGAGCTGTGAAAACAATCTCTAACTATGGCCCGGTTTTGAGGCCATTGATCAGAGCAAAGAGTAGAGGATTCTCAGATGTACTATATTTAGACTCTGCCACGAGAAGAAACGTGGAGGAGGTCTCATCGTGTAATATTTTTGTTGTCAAGGGCAACGTTATTTCAACCCCTGCTACAAGTGGAACCATTCTATCGGGGATCACCAGGAAAAGCCTCATAGAGATTGCTCGTGATCGCGGTTACCAGGTTGAAGAACGTACAGTATCGATAGATGAATTGATTGGTGCTGACGAAGTATTTGGCACGGGCACTGCCGTTGTGGTTGCTCCAGTAGGAAGTGTTACATATCAGGGCAGAAGATTTACATTCAAGACAGGTCCCAAGACTGTTTGTGAGGAACTGCGATCTTTTCTTACTGGGATTCAAAAAGGTCTGATTCCAGATGAGAAGGGTTGGATTGTTGAGCTTGATTAA 1167 0.4542 MIQRSLCSRSLGQSLLRSASSSQKGGASVGFSSQASSSLQPLPESPTYSDDENSEVDWDNLGFGLIPTDYMYLNKCSQGNKFGGGQLSRYGNIELSPSAGVINYGQGLFEGTKAYRKPNGKLLLFRPEQNAIRMKIGSERMCMPCPSVHNFVDALKQTALANKRWVPPPEKGALYLRPLLIGTGPILGLAPASEYTFLIYASPVGNYFKGGSAPLNLYVEDEFDRAAPRGTGAVKTISNYGPVLRPLIRAKSRGFSDVLYLDSATRRNVEEVSSCNIFVVKGNVISTPATSGTILSGITRKSLIEIARDRGYQVEERTVSIDELIGADEVFGTGTAVVVAPVGSVTYQGRRFTFKTGPKTVCEELRSFLTGIQKGLIPDEKGWIVELD* 389
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte3g01197 388 PIRSF BCAT1 34 388 IPR005786 GO:0004084|GO:0009081
Pte3g01197 388 Pfam Amino-transferase class IV 107 345 IPR001544 GO:0003824
Pte3g01197 388 MobiDBLite consensus disorder prediction 18 54 - -
Pte3g01197 388 Coils Coil 387 388 - -
Pte3g01197 388 ProSitePatterns Aminotransferases class-IV signature. 271 300 IPR018300 GO:0003824
Pte3g01197 388 FunFam Branched-chain-amino-acid aminotransferase 216 387 - -
Pte3g01197 388 MobiDBLite consensus disorder prediction 18 49 - -
Pte3g01197 388 FunFam Branched-chain-amino-acid aminotransferase 37 214 - -
Pte3g01197 388 CDD BCAT_beta_family 94 375 IPR033939 GO:0004084|GO:0009081
Pte3g01197 388 NCBIfam branched-chain-amino-acid transaminase 85 387 IPR005786 GO:0004084|GO:0009081
Pte3g01197 388 PANTHER AMINO ACID AMINOTRANSFERASE 41 387 IPR005786 GO:0004084|GO:0009081
Pte3g01197 388 Gene3D - 218 388 IPR043132 -
Pte3g01197 388 Gene3D - 33 217 IPR043131 -
Pte3g01197 388 SUPERFAMILY D-aminoacid aminotransferase-like PLP-dependent enzymes 47 384 IPR036038 GO:0003824
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte3g01197 Pte-Chr3 10274042 10276977 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte3g01197 K00826 - qsa:O6P43_019059 546.199
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte3g01197 3 10274042 10276977 Pte3g01197 3 10274042 10276977 RCT