Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte3g01174 ATGAAGTTTATGAAGTTGGGTTCGAAGCCTGATACTATTCAAGCTGATGGGAAGTCTGTAAGGTATGTGTCATCTGAACTGGCTACTGATGTTGTCATAAATGTGGGTGATGTTAAGTTTTACCTTCACAAGTTCCCCTTGTTATCCAAGAGCAATCGTTTGCACAAGCTACTATCAAAGGTCAATGAGGAGAATGACGAAATTCATATAGTTGATTTCCCTGGTGAGGCAAAAACCTTTGAGATATGTGTGAAGTTCTGCTATGGAATGACAGTCACTCTTAATGCATACAATGTGGTGGCTGTTCGTTGTGCTGCTGAATACCTTGAAATGACTGAGGATGTTGATCGTGGAAATTTAATTTTTAAAATTGAGGTGTTTCTGAACTCGAGTATCTTCCGCAGCTGGAAAGATACTATTATTGTTCTTCAAACAACCAAATCACTCTCACCTTGGTCCGAAGATCTGAAGATTGTGGGGAGATGTGTTGATTCCATTGCTTCTAAAACTTCAGTGGACCCAGCAAATATCACGTGGTCCTATACATACAACAGAAAATTGGCTGAGACTGCAAAGACTACAGAGGAACTCATGAATTTCCAAGATAAGCTTGAAGCTGTTCCAAAGGATTGGTGGGTTGAAGATATATGCGAGCTGGATATGGATCTTTACAAAAGAGTAATGATTTCAGTGAAATCTAAGGGAAGAATGGATGGTGCAGTTATTGGAGAAGCTATTAGAACCTATGCTATTCGATGGTTGCCAGATTCTGTCGACGCGTTGTTACTCTCTGATGCTCACACATCCAGGTATAAATATCTGCTAGAAATTATTGTCTGCTTATTGCCATGTGAAAAGGGAGTTGGTTGTTCATGCGGTTTCTTGCTTAAACTTTTGAAAGTTGCCACATTAGTTGGAGCTGATGAGTCTTCAAGGGAAATTTTGGTGAAGAGAATCAGCCAGAAATTGCACGAAGCTTCTGTTAAAGATTTATTGATTCCCTCAAGGCCACCCCAAGTGACTGTATTTGATGTCCAACTGGTGCAACGTATTGTGAATCAATATGTGTCACACGAAATGGGCGATTTATGCATGGATGATAATGATAAAGCACCTGTTGATTTTATTTTGGTGCCTAATTCGATGATGGATGTTGGTAAACTAGTTGATGGCTATCTTGGTGAAATTGCGCACGATCCAAATCTCACCGTGTCTGGCTTCGTTGAGCTGTCACAGTCTATTCCTAAGTCTGCTAGACCTGTGCATGACGGTCTGTACAAAGCCATTGACATTTATCTCGAGGAGCACCCCAAATTGACTAAAGCTGAAAGGAAGCAGATATGTAATGTGATGGACCTTCAAAAAATTTCTAGGGATGCATCTATGCATGCGGCACAGAACGAGCGCCTCCCACTCAGAGTTGTGGTGCAGGTCCTTTTTTTTGAGCAGGTTAGAGCTTCCTCTGCAGGTGGAGGAACGAGTGATTGTTCAGTCAATCCTTTACGTTTCAGTGCTGCCACAGTAGACACAGAATGCGACAAGAAATCAATTGAAAACTCTAGATCCCTCAGAAGTCAAATGATTCAAATGAAGATAAAAGCTGAGGTGGTTGAGAAGAATGATAAACTGTGTAAGAACAGCAGCAAAAACAGTCGGAGTGGTGTACAACTGTTGCCATCCAGATCGAGGAGAATATTTGATAAACTATGGGTTGTGGGCAAAGGTCATGTAGAAAACAAGAGCTCTGAGACGTCAGGGAGCTCTCAGAGCCCACCATCATTAGTACCTGGTGGCACAAAATCCTCTGGTTCATCTTCAAGACACAGGAGATATTCCATTTCATAA 1845 0.4146 MKFMKLGSKPDTIQADGKSVRYVSSELATDVVINVGDVKFYLHKFPLLSKSNRLHKLLSKVNEENDEIHIVDFPGEAKTFEICVKFCYGMTVTLNAYNVVAVRCAAEYLEMTEDVDRGNLIFKIEVFLNSSIFRSWKDTIIVLQTTKSLSPWSEDLKIVGRCVDSIASKTSVDPANITWSYTYNRKLAETAKTTEELMNFQDKLEAVPKDWWVEDICELDMDLYKRVMISVKSKGRMDGAVIGEAIRTYAIRWLPDSVDALLLSDAHTSRYKYLLEIIVCLLPCEKGVGCSCGFLLKLLKVATLVGADESSREILVKRISQKLHEASVKDLLIPSRPPQVTVFDVQLVQRIVNQYVSHEMGDLCMDDNDKAPVDFILVPNSMMDVGKLVDGYLGEIAHDPNLTVSGFVELSQSIPKSARPVHDGLYKAIDIYLEEHPKLTKAERKQICNVMDLQKISRDASMHAAQNERLPLRVVVQVLFFEQVRASSAGGGTSDCSVNPLRFSAATVDTECDKKSIENSRSLRSQMIQMKIKAEVVEKNDKLCKNSSKNSRSGVQLLPSRSRRIFDKLWVVGKGHVENKSSETSGSSQSPPSLVPGGTKSSGSSSRHRRYSIS* 615
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte3g01174 614 Coils Coil 613 614 - -
Pte3g01174 614 ProSiteProfiles NPH3 domain profile. 210 485 IPR027356 -
Pte3g01174 614 Pfam NPH3 family 210 461 IPR027356 -
Pte3g01174 614 SMART BTB_4 29 126 IPR000210 GO:0005515
Pte3g01174 614 Gene3D Potassium Channel Kv1.1; Chain A 18 117 IPR011333 -
Pte3g01174 614 MobiDBLite consensus disorder prediction 578 614 - -
Pte3g01174 614 Pfam BTB/POZ domain 25 113 IPR000210 GO:0005515
Pte3g01174 614 MobiDBLite consensus disorder prediction 577 614 - -
Pte3g01174 614 PANTHER OS12G0117600 PROTEIN 24 574 IPR043454 -
Pte3g01174 614 SUPERFAMILY POZ domain 21 115 IPR011333 -
Pte3g01174 614 ProSiteProfiles BTB domain profile. 29 96 IPR000210 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte3g01174 Pte-Chr3 10014858 10019791 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte3g01174 22 491 EF-hand Containing Proteins AT3G44820 35.657 5.15e-95 303
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte3g01174 - - cave:132189238 854.744
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte3g01174 3 10014858 10019791 Pte3g01174 3 10014858 10019791 RCT