Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte3g01173 ATGCATAGATTGAAGCCTCTCGTGCAACTAAGGAAGTACTGCTCGTTGCAAGCATTAAGCTTTCAGTATAGACCCTTTTCTGCTCAGCCAGAATACGTTTACCATCAAGACAATGTTCAAAATCAGATTCTAGTAGAAGGAAGAGCTAAATCTAGAGCAGCTGTTCTCAACAGGCCATCTGTGCTCAATGCACTCAATTCTTCTATGGTTGCTCGACTTAAGAGGCTGTATGAATCTTGGGAAGCAAATCCCGATATTGGTTTCGTTTTATTGAAGGGTAGTGGCAAGGCTTTCTGCGCTGGTGCAGATGTTGTTTCGCTTTACAATTTACTGAAGGAAGGAAATGATGAGGAGTGTAAACTTTTTTTTAAGACATTATATTCATTGGCTTATCTTCAGGGTACATATTTGAAGCCCCATGTGGCTATTTTGGATGGTATGACAATGGGATGTGGTGGTGGAATATCCTTTCCAGGAATGTTTTGTCTGGCTACTGATAGAACTGTTTTTTCTCAACCTGAGGTTCAAATGGGTTTTCACCCTGATGCAGGAGCTTCTTATTATCTTTCTCGATTGCCTGGCTACTTGGGTGAATATTTGGCCCTCACTGGGGACAAGCTAAATGGTGTAGAAATGATTGCTTGTCGCCTTGCCACTCACTACTGTCTAAATGCTAGACTTCATTTGATGCAAGAGCGCCTTGGCATTTTGGTAACTGATGAACCCTCTATTATAGAGACATCTCTGTCACATTACGGTGACCTCGTCCATCCAGATAGTGGGAGTGTAGTTTACAAGATTGAGACTATTGATAAATGTTTCAGCAAGGATACCATTGAGGAAATAATTGATACTTTGGAGGAGGAGGAGACTGAGTCACACAGTGAATGGTGTACAAGTGCCCTTAAAAAAATTCGTGAAGCCTCACCCTTGAGTTTAAAAGTTACTCTACGATCAATACGTGAAGGTAGATTTCAAACTCTTGATCAATGCCTTGCTCGGGAGTATCGGATGTCCCTACGCAGAATTTCTAAAGATGTCTCCTCCGACTTCTATGAGGGTGTTCGAGCGCGGTTAGTGGACAAGGACTTTGCACCAAAGTGGGATCCTCCAAGTTTAGCAGAAGTATCAAATGACATGGTTGGCAGCTATTTTTCACCACTTAACGAAGTTGAGCCTGAACTAGAACTTCCCACTTCGACCCGAGAGCCTTATATGTGA 1221 0.4242 MHRLKPLVQLRKYCSLQALSFQYRPFSAQPEYVYHQDNVQNQILVEGRAKSRAAVLNRPSVLNALNSSMVARLKRLYESWEANPDIGFVLLKGSGKAFCAGADVVSLYNLLKEGNDEECKLFFKTLYSLAYLQGTYLKPHVAILDGMTMGCGGGISFPGMFCLATDRTVFSQPEVQMGFHPDAGASYYLSRLPGYLGEYLALTGDKLNGVEMIACRLATHYCLNARLHLMQERLGILVTDEPSIIETSLSHYGDLVHPDSGSVVYKIETIDKCFSKDTIEEIIDTLEEEETESHSEWCTSALKKIREASPLSLKVTLRSIREGRFQTLDQCLAREYRMSLRRISKDVSSDFYEGVRARLVDKDFAPKWDPPSLAEVSNDMVGSYFSPLNEVEPELELPTSTREPYM* 407
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte3g01173 406 Gene3D - 37 400 - -
Pte3g01173 406 Pfam Enoyl-CoA hydratase/isomerase 53 385 IPR045004 -
Pte3g01173 406 PANTHER 3-HYDROXYISOBUTYRYL-COA HYDROLASE-RELATED 37 400 IPR032259 GO:0003860
Pte3g01173 406 CDD crotonase-like 55 227 - -
Pte3g01173 406 SUPERFAMILY ClpP/crotonase 53 371 IPR029045 -
Pte3g01173 406 FunFam Probable 3-hydroxyisobutyryl-CoA hydrolase 2 37 401 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte3g01173 Pte-Chr3 10007580 10013037 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte3g01173 24 407 Acyl Lipid Metabolism Gene Families AT4G31810 68.992 0.0 563
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte3g01173 K05605 - cave:132189791 573.548
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte3g01173 3 10007580 10013037 Pte3g01173 3 10007580 10013037 RCT