Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte3g01162 ATGTCTCCGGCTGTGTCTTCTCCACTACCTTCTTGCTTTCGTCCTTCAACATCTACAACTCCCGACGACTACCCGTATCCGCCTCCGCCACAACCACCATTACCGCCGCTTTCCACCAAGCCCAACCTCGCTACTTACCTCTACCACACGGATCAGGGCTTAGTCTCTCTAACGTGGTCTCGCTCCGTTCTGGGTCGCTCGCTCCATGTCCAGCTTCATCACCATCACCACCCATTTGATTCACCTCCATTGAATTTCCCTGCTTCCTCTTCTTCAAGTTTTCAACTTCACATCAAGCCCTTCATTTTCTGGAAAAAGCATGGATCCAAGAAGCTTTCACCCAGAACCCACATCTTCTGGAGTCTCAGCAGGGCGAAATTCGGGTCGGGTCCAGAACCCAACTCCGGTTTCTATGTTGCCCTGGTCGTCGACAATGAGATAACTCTTCTAGTGGGAGATTCAATTAAGGATGCCTATGCAAAAACCAAAGCGCAGAAGCCCAAAAGTTCACAGCTTCTTGTTCAGAAAAGAGAGCATGTTGTTGCCAACAAAATCTACACCACAAGGACAAAAATTGGAGGCAAGATGAGAGACATACAGATCGATTGTGGTTACAGCGACAATACCAAGCTCTGTTTTAGTGTGGACAACCAACGGGTCTTGCAAATTAAGCGATTGAAATGGAAATTCAGGGGAAATGAAAGGGTTGAAGTGGATGGAGTGCCCATTCACATCTCATGGGACGTGTACAATTGGCTGTTTGACAGTGAAATCAATGACGGCCATGCGGTTTTCATGTTCAAGTTTGAGGAGGAAGAAGATGGACAAGGCAAGGAAGTCAATGACAGGAGTTTGATTAATTTTTTAACACAACAGAGCTTGCATGAATGGGGTAAAATTGGCAAGAACTCTTCATCGTCTTCAGTTTCCATGTCATCGTCTGCTGGATCTTTCGGAGCAAGCTCATCTGTAATGGAGTGGGCAAGTACAGAAGAGAACGAGTTGGCTGGTCCAATTGGGTTTTCTTTGTTGGTTTATGCCTGGAAAAGGTGA 1053 0.4663 MSPAVSSPLPSCFRPSTSTTPDDYPYPPPPQPPLPPLSTKPNLATYLYHTDQGLVSLTWSRSVLGRSLHVQLHHHHHPFDSPPLNFPASSSSSFQLHIKPFIFWKKHGSKKLSPRTHIFWSLSRAKFGSGPEPNSGFYVALVVDNEITLLVGDSIKDAYAKTKAQKPKSSQLLVQKREHVVANKIYTTRTKIGGKMRDIQIDCGYSDNTKLCFSVDNQRVLQIKRLKWKFRGNERVEVDGVPIHISWDVYNWLFDSEINDGHAVFMFKFEEEEDGQGKEVNDRSLINFLTQQSLHEWGKIGKNSSSSSVSMSSSAGSFGASSSVMEWASTEENELAGPIGFSLLVYAWKR* 351
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte3g01162 350 PANTHER EXPRESSED PROTEIN 9 349 IPR008586 -
Pte3g01162 350 MobiDBLite consensus disorder prediction 1 20 - -
Pte3g01162 350 Pfam Plant protein of unknown function (DUF868) 41 349 IPR008586 -
Pte3g01162 350 MobiDBLite consensus disorder prediction 1 38 - -
Pte3g01162 350 MobiDBLite consensus disorder prediction 21 38 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte3g01162 Pte-Chr3 9930318 9931370 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte3g01162 9 268 EF-hand Containing Proteins AT5G28150 34.444 6.96e-49 164
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte3g01162 - - qsa:O6P43_015743 489.96
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte3g01162 3 9930318 9931370 Pte3g01162 3 9930318 9931370 RCT