Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte3g01143 ATGGAGAGTCTGCCGACGACGTCGAAATCCGACCGGCGAGGGAGATCAAAGGCTTCTTCCCAGTCGTTCACACCTTCACTGTTTCTGGCCTTCTTCTCTTGCGTCGCTTGGCTTTATGTGGCTGGCCGTTTATGGCAAGATGCAGAAAATAGAAGGTTGCTTACTAGTCTCCTGAAGAAGAACTTAGGCCAGAGGCCCAAGCTTCTTACGGTTGAAGATAAGCTGATGGTTCTAGGATGCAGAGATATAGAGCGGAGGATTGTTGAAGCTGAAATGGAGTTAACTCTGGCAAAGAGCCAAGGCTATCTGAAGAACAGTTTGCAACAAACTGGTGGATCTTCTTCAGATAAGCATCTTCTTGCAGTTATAGGAGTTTATACTGGATTTGGAAGTCGCTTGAAACGTAATGTTTTCAGAGGATCTTGGATGCCAAGAGGTGATGCACTAAAAAAACTAGAGGAAAGAGGAGTGGTAGTACGTTTCGTAATTGGTCGGAGTCCCAATCGAGGTGATAGCTTAGATCGCAATACTGATGAAGAAAATCGCTCAACAAAGGATTTCCTGATACTAGAAGATCATGAAGAGGCCCAGGAAGAGTTGCCTAAGAAAGCGAAGTTCTTTTTCAGTACTGCAGTACAAAACTGGGATGCAGACTTCTATGTGAAAATTGATGACAATATTGAACTTGATCTTGAGGGATTAATTCAGCTTCTTGAACACCGTCGTGGTCAGGATGGAGCATACATTGGATGCATGAAGTCAGGAGAAGTGGTTTCTGAAGAGGGAAAGCAGTGGTATGAACCAGAATGGTGGAAATTTGGGGATGAAAAGACGTACTTCCGACATGCTGCTGGTTCACTTCTCATACTGTCTAAGAATTTGGCTCAATATATATACGTAAACAGTGCATCTCTAAAGACTTATGCCCACGATGATACCTCTTTGGGCTCATGGATGATGGGAATCCAAGCAACATATATAGATGATAATCGCTTGTGCTGCGGTAGCATTAAACAAGATTATGGGTTTTTGATTGCTGGAAAACACAGTAATCTTTGCTTCCATTCTTCTCTGGATCAAATATTGATGGCAGAGCATGGTGTTGACAGTCAAGTAGTTCTTGTTATTGCTGGAGAAGGTGTGGATGTAACAGCTGACCGATACATCTTCCATGTCAAAAGAACCGATGGTCTCAGTGTTCTTTGCGTTGCTGACGATACTGCGGGAAGAAGGATTCCTTTTGCATTTCTTGAAGATATTCATAAAAAATTTGTAAGAACTTATGGACGTGCAGTTCATTCAGCTCATGCCTATGGAATGAATGACGAGTTCTCTAGGGTTTTAAGCCAGCAAATTGACTATTATTCCAGTGATCCGAATGCAGATAGGATGAATCGAATCAAAGGTGAAATGAGTCAGGTGCGTAATGTGATGATAGAAAATATTGACAAAGTTTTAGAGAGAGGTGATCGCTTGGAATTGCTGGTTGATAAAACTGCTAATATGCAAGGAAATACATTACGATTCAGAAAACAAGCTCGCCGTTTCAGGAACACAGTGTGGTGGAGAAATGTCAAGCTTACGTATGTTTTCCTTTCAAAAGCCTTTTATATTCCTGGTTGCACTAATAATCCTCCTGCTGCTTATTGTCTATGTCGTATTGGCTTTTGTTTGCCATGGACTTACACTTCCATCCTGCCTGAAATAAGGAGATCTTCGAGTGAGTTTTCATTCTGCTTTGAGAGGTTAATGTTCCCAGTGTTTCCTTTAATTTGCCGTACCTTGTATTTGTCAGCCATTGAGCTTGTATTTGTAGGAAATTGGATAGGGAAGAAGGAACGCGAAAGTTTTTTGTATCCCGACTTTTCTGGATTGACGGGTCATCCTAGTGGAGAAATCGGTACGATGAGTTCTAGGGACTGTGGCGGAGCTCTGGAATACGTTACTATTAATCTGAGGAGCAAGTATTCTGCTGTTTGGCGATGGACGGTTCATAATTTTCCGAGAATCAAAGCTAGGGCAATGTGGAGCAAGTGCATGGTCACCATTGATAACGAAAGCATGAAAAATTGCACGGTTGTGAAGGTGCATAGCGTGAATAAACAGGGTCTCCTTCTGGAAGTGGTGCAAGTTTTAACAGACTTGAATCTTGAAATCACTAAGAGCTATATTTCATCCGACGCGGGTGGTTCATGGATGGTATTGTTTCATGTAAGAAATCAACATGGCGACAAAGTTAGAGACCAGAAAGTGATTAACTTTATCCAGCAGGCATTGAGTAAATCAAAGGTTTCTATAAAATCAGTCAAGGCGAAGGCCTACTTCGACAAGGAATTCTCATCTGGTGAGTATCATGAAAATGTGCGCACAGCCATTGAGCTGAGTGGAACGGACAGGCCTGGTTTGTTCTCTGAGATATCGGCAGCTTTAAACGACCTACATTGTAAAGTTGTAGAAGCTCACGCATGGAGTCACAATGACAGATTAGCATGTGTTGCTTACATTTCCGATGAATCCACAGATTCACCAATCGAAGACTTCCAACCGTCTTGCTTCCATAGAAAAACCACCTCACTACTGTTCTCCCCGAGCAACCACCCGCCACCAGTCCAAGGTTTCTTGGGGGGAGAAGACACCATGTCTGATGTGGAACGCAGGTTACACCAGCTCATGCTTTCTGTTGGGGATATCGATGGCCCGTCAACTAGATCAAGTACGTCGACATCAACGTCCATATCGGAAAGTGACGACGAAATCGGCAGGAACACGCCGGTGGTAAGAGTAGAGAATTGCGATGAAAAAGGCTACTCTATGGTAACGATAGTGTGTGATGACAGACCGAGGCTCATGTTTGATACAGTTTGCACACTTACCGATATGCAGTACATGATTTTTCATGCTGGCATAAGTTGTAATGCAAACCATGCCTTTCAGGATTATTTTATCAGACACATTGATGGGTACGCTGTGAGCACAGAAAGCGAGAAACAACGAGTAATCAAATGCTTAGAGGCCGCAATAGAACGCAGAGTTTGTGAGGGTGTCCGGCTAGAGTTGTGTGCAGAAAATAGGGTGGGGTTGCTGTCAGACATTACCCGAATCCTTAGAGAGAATGGACTAACAGTTGTGAGAGCAGATGTGGAAACGCAAGGTGGGAAGTCTAAGAATGCCTTCTATATAAGAGACATCTCAGGGAATGAAGTTGACATGGATTTTGTTGAGTCAATGAAGAGAGAAATAATGGGGCCTATCGTACTTCAAGTCTGGAATGAAAAAAAGAAGCCTGATTCTCCTGCGACAGATCATCAAGTTCAGATGGATACAACTGATACCTTCTTCAACCATAGGCAGTTACCCATCACAGTGACCAAAGAACAGAAAACCCTGGCCTTTAATCTACAACAAACCATAACCAAGGATATTTCTTTTGTTCCAGAGGCCTGCCATATCTCTGGAGCACGCAACTAA 3468 0.4305 MESLPTTSKSDRRGRSKASSQSFTPSLFLAFFSCVAWLYVAGRLWQDAENRRLLTSLLKKNLGQRPKLLTVEDKLMVLGCRDIERRIVEAEMELTLAKSQGYLKNSLQQTGGSSSDKHLLAVIGVYTGFGSRLKRNVFRGSWMPRGDALKKLEERGVVVRFVIGRSPNRGDSLDRNTDEENRSTKDFLILEDHEEAQEELPKKAKFFFSTAVQNWDADFYVKIDDNIELDLEGLIQLLEHRRGQDGAYIGCMKSGEVVSEEGKQWYEPEWWKFGDEKTYFRHAAGSLLILSKNLAQYIYVNSASLKTYAHDDTSLGSWMMGIQATYIDDNRLCCGSIKQDYGFLIAGKHSNLCFHSSLDQILMAEHGVDSQVVLVIAGEGVDVTADRYIFHVKRTDGLSVLCVADDTAGRRIPFAFLEDIHKKFVRTYGRAVHSAHAYGMNDEFSRVLSQQIDYYSSDPNADRMNRIKGEMSQVRNVMIENIDKVLERGDRLELLVDKTANMQGNTLRFRKQARRFRNTVWWRNVKLTYVFLSKAFYIPGCTNNPPAAYCLCRIGFCLPWTYTSILPEIRRSSSEFSFCFERLMFPVFPLICRTLYLSAIELVFVGNWIGKKERESFLYPDFSGLTGHPSGEIGTMSSRDCGGALEYVTINLRSKYSAVWRWTVHNFPRIKARAMWSKCMVTIDNESMKNCTVVKVHSVNKQGLLLEVVQVLTDLNLEITKSYISSDAGGSWMVLFHVRNQHGDKVRDQKVINFIQQALSKSKVSIKSVKAKAYFDKEFSSGEYHENVRTAIELSGTDRPGLFSEISAALNDLHCKVVEAHAWSHNDRLACVAYISDESTDSPIEDFQPSCFHRKTTSLLFSPSNHPPPVQGFLGGEDTMSDVERRLHQLMLSVGDIDGPSTRSSTSTSTSISESDDEIGRNTPVVRVENCDEKGYSMVTIVCDDRPRLMFDTVCTLTDMQYMIFHAGISCNANHAFQDYFIRHIDGYAVSTESEKQRVIKCLEAAIERRVCEGVRLELCAENRVGLLSDITRILRENGLTVVRADVETQGGKSKNAFYIRDISGNEVDMDFVESMKREIMGPIVLQVWNEKKKPDSPATDHQVQMDTTDTFFNHRQLPITVTKEQKTLAFNLQQTITKDISFVPEACHISGARN* 1156
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte3g01143 1155 SUPERFAMILY ACT-like 688 754 IPR045865 -
Pte3g01143 1155 Coils Coil 80 100 - -
Pte3g01143 1155 ProSitePatterns Synaptobrevin signature. 481 500 IPR001388 GO:0016020|GO:0016192
Pte3g01143 1155 Pfam Synaptobrevin 461 532 IPR042855 -
Pte3g01143 1155 ProSiteProfiles ACT domain profile. 1016 1093 IPR002912 -
Pte3g01143 1155 ProSiteProfiles Longin domain profile. 383 448 IPR010908 -
Pte3g01143 1155 Gene3D Longin domain 379 459 - -
Pte3g01143 1155 FunFam Vesicle-associated membrane protein 7 461 538 - -
Pte3g01143 1155 MobiDBLite consensus disorder prediction 896 919 - -
Pte3g01143 1155 Gene3D - 460 527 - -
Pte3g01143 1155 SUPERFAMILY ACT-like 790 840 IPR045865 -
Pte3g01143 1155 PRINTS Synaptobrevin signature 468 487 IPR001388 GO:0016020|GO:0016192
Pte3g01143 1155 PRINTS Synaptobrevin signature 488 507 IPR001388 GO:0016020|GO:0016192
Pte3g01143 1155 CDD R-SNARE 462 521 - -
Pte3g01143 1155 Gene3D - 153 331 - -
Pte3g01143 1155 SUPERFAMILY SNARE fusion complex 458 524 - -
Pte3g01143 1155 SMART Longin_2 369 447 IPR010908 -
Pte3g01143 1155 ProSiteProfiles v-SNARE coiled-coil homology domain profile. 463 523 IPR042855 -
Pte3g01143 1155 CDD ACT_ACR_3 936 1010 - -
Pte3g01143 1155 Gene3D - 787 852 - -
Pte3g01143 1155 MobiDBLite consensus disorder prediction 898 918 - -
Pte3g01143 1155 FunFam Hexosyltransferase 137 332 - -
Pte3g01143 1155 ProSiteProfiles ACT domain profile. 693 769 IPR002912 -
Pte3g01143 1155 Pfam Regulated-SNARE-like domain 382 445 IPR010908 -
Pte3g01143 1155 SUPERFAMILY SNARE-like 383 455 IPR011012 -
Pte3g01143 1155 CDD Longin 383 455 IPR010908 -
Pte3g01143 1155 CDD ACT_ACR_4 1014 1086 - -
Pte3g01143 1155 SUPERFAMILY ACT-like 1014 1065 IPR045865 -
Pte3g01143 1155 PANTHER ACT DOMAIN-CONTAINING PROTEIN ACR4-RELATED 678 1083 IPR040217 -
Pte3g01143 1155 Pfam Domain of unknown function (DUF4094) 25 100 IPR025298 -
Pte3g01143 1155 Pfam Galactosyltransferase 134 327 IPR002659 GO:0006486|GO:0016020|GO:0016758
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte3g01143 Pte-Chr3 9750663 9771024 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte3g01143 76 340 Glycosyltransferase AT2G25300 80.755 5.99e-154 458
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte3g01143 K20854 - qsa:O6P43_019464 587.8
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte3g01143 3 9750663 9771024 Pte3g01143 3 9750663 9771024 RCT