Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte3g01137 ATGGCTTTGAACAACCTCTCTGTGATCATCGTCCTCTTCTCTTTGCTTCTCTATTCAACCAGCTACACTGATGCGTGCGGCTGCACCAAGCCAACTCCTGCTCCATCGCCTCCTGCATTCAAAGAACAATGTCCACTGGATACATTGAAGCTAGGGGTTTGTGCTGACATCCTTGGACTTGTTCACGTTGTTGTTGGAAACCCACCTTCCGGTACCGCTTGTTGTCCTTTACTAAAAGGCTTGACAGATCTTGAGGCTGCCCTTTGTCTGTGTACCGCCATTAAAGGCAATGTGCTTGGTCTCAATTTGAATGTGCCAATTGCTCTCAGCGTGATTCTCAGTGCTTGTCAGAAAACCGTTCCTCCAGGTTTCCAATGTCCATGA 384 0.4792 MALNNLSVIIVLFSLLLYSTSYTDACGCTKPTPAPSPPAFKEQCPLDTLKLGVCADILGLVHVVVGNPPSGTACCPLLKGLTDLEAALCLCTAIKGNVLGLNLNVPIALSVILSACQKTVPPGFQCP* 128
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte3g01137 127 Gene3D - 42 127 IPR036312 -
Pte3g01137 127 CDD HPS_like 43 126 IPR027923 -
Pte3g01137 127 SMART aai_6 44 126 IPR016140 -
Pte3g01137 127 PANTHER - 10 126 - -
Pte3g01137 127 Pfam Hydrophobic seed protein 44 127 IPR027923 -
Pte3g01137 127 SUPERFAMILY Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin 47 127 IPR036312 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte3g01137 Pte-Chr3 9708465 9709281 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte3g01137 34 127 Acyl Lipid Metabolism Gene Families AT4G22490 38.298 9.24e-16 66.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte3g01137 - - sspl:121784790 174.096
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte3g01137 3 9708465 9709281 Pte3g01137 3 9708465 9709281 RCT