Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte3g01130 ATGGCACCCAGCACGATCCGCAAAGCTATTGGAGCCGTCAAGGACCAGACGAGTATTGGGTTGGCTAAGGTGGCCGGCAATATGGCACCGGACCTGGAGGTTGCCATTGTCAAGGCCACCAGTCACGACGATGACCCGGCCAGCGAGAAGTACATCAGAGAGATCTTGCACTTGACGTCGCTATCTCGTGGATATGTTCACGCCTGCGTGTCGGCAGTGTCCAAGAGGTTGGGGAAGACCAGGGACTGGATTGTGGCGCTCAAAGCACTCATGCTCGTGCATAGGTTGATGAATGAAGGTGATCCACTTTTTCAAGAAGAGATCTTGTATGCTACCAGGAGAGGAACACGGCTACTCAACATGGCTGACTTCAGGGATGAAGCTCACTCTAGTTCTTGGGATCACTCGGCTTTTATCAGGACCTATGCTATGTATTTGGATCAACGGCTTGAGATGATACTTTTCGACAGGAAAAGTGCTAGTGTTGGTGATGGTCGTGGCGGTAGTGGAAGTGTCGGTGGGGACGATAGATCCTTTGGAGGCAGAGACAATTTCCGATCACCTCCGCCCAGAAATTATGAGTATGAGTATGCAGAGCCCAGGGGTGAAGGTAGTTACGGGAATTACGGGATGCGCAGGACGAGATCCTTTGGTGATGTGAGTGAAGCTGCTGGAAGAGACGGGAGGGATGAGAAAAGGGTTGTGACTCCATTAAGGGAGATGACACCTGAAAGGATTTTTGGCAAGATGGGTCACTTACAGAAGCTATTGGACAGGTTTTTGGCTTGTCGTCCTACTGGATTGGCCAAAAATAGTAGGATGATATTGATTGCTTTGTATCCTTCTGTGAGGGAGAGTTTCCAGTTATATGCAGATATCTGTGAGGCACTGGCTGTGTTGCTGGATAAGTTTTTCGATATGGAGTATCCTGACTGTGTTAAGGCGTTTGATTCTTATGCCAGTGCAGCTAAACAAATTGACGAGCTTGTAGCCTTTTACAATTGGTGCAAAGATACTGGTGTTGCAAGGTCTTCCGAGTACCCCGAAGTTCAGAGGATAACCAGTAAGTTACTTGAGACATTGGAGGAGTTTGTGAGAGATAGAGCAAAAAGACCAAAAAGTCCGGAGAGGAAGGAGGAAGCTCCTCCTGCTGCCGAAATTGAGGAGCCAGTGCCGGATATGAATGAAATTAAGGCGTTACCTCCGCCGGAGGACAGCACTCCACCTCCTGTACCCGAGGCAGAGCCTCCGAAGCCTCAGCAACAGGTAACAGGGGACTTGGTGGATCTGAGAGAAGAAGCAATCAGTGCAGATGATCAAGGTAATAGATTTGCTCTGGCATTATTTGCTGGTCCGGCTGCAAATAATGGAGATGGATCATGGGAAGCATTCCCTTCGAATGGACAGCCTGAAGTTACTTCAGCTTGGCAGAACCCAGCAGCTGATACTGGCAAAGCTGATTGGGAATTAGCACTGGTAGAGACAGCCAGCCATTTATCAAAGCAGAAGGCAGCTTTAGGTGGCGGTTTAGATCCGTTACTATTAAATGGGATGTATGATCAGGGTCTAGTGAGACAGCATACCAGTACTGCTCAATTGAGTGGAGGAAGTGCAAGCAGTGTGGCATTACCAGGTCCAGGCAAGACAACTCCAGTTTTAGCCCTCCCAGCCCCAGATGGATCCGTAAAGCCAGTTAATCAGGACCCATTTGCAGCATCATTAAGCGTTCCACCCCCTTCGTATGTCCAGATGTCTGACATGGAGAAAAAACAACATTTACTTGTGCAGGAGCAGGTGGTGTGGCAGCAGTATGCAAAGGATGGAATGCAAGGTCAATCTAGTTTGGCCAGAATTAACGGAACAGGATATTATGGCCCAGCTCCTATGCCAATGGCAATGATGCCTTACGGAATGCCCCCAGTTAACGGAGTGGGGACTCCAGCCGGGCCTGACATGCGTCACAGAAAATAA 1971 0.4911 MAPSTIRKAIGAVKDQTSIGLAKVAGNMAPDLEVAIVKATSHDDDPASEKYIREILHLTSLSRGYVHACVSAVSKRLGKTRDWIVALKALMLVHRLMNEGDPLFQEEILYATRRGTRLLNMADFRDEAHSSSWDHSAFIRTYAMYLDQRLEMILFDRKSASVGDGRGGSGSVGGDDRSFGGRDNFRSPPPRNYEYEYAEPRGEGSYGNYGMRRTRSFGDVSEAAGRDGRDEKRVVTPLREMTPERIFGKMGHLQKLLDRFLACRPTGLAKNSRMILIALYPSVRESFQLYADICEALAVLLDKFFDMEYPDCVKAFDSYASAAKQIDELVAFYNWCKDTGVARSSEYPEVQRITSKLLETLEEFVRDRAKRPKSPERKEEAPPAAEIEEPVPDMNEIKALPPPEDSTPPPVPEAEPPKPQQQVTGDLVDLREEAISADDQGNRFALALFAGPAANNGDGSWEAFPSNGQPEVTSAWQNPAADTGKADWELALVETASHLSKQKAALGGGLDPLLLNGMYDQGLVRQHTSTAQLSGGSASSVALPGPGKTTPVLALPAPDGSVKPVNQDPFAASLSVPPPSYVQMSDMEKKQHLLVQEQVVWQQYAKDGMQGQSSLARINGTGYYGPAPMPMAMMPYGMPPVNGVGTPAGPDMRHRK* 657
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte3g01130 656 FunFam Clathrin coat assembly protein 3 156 - -
Pte3g01130 656 SUPERFAMILY ENTH/VHS domain 30 151 IPR008942 -
Pte3g01130 656 Gene3D - 2 156 IPR008942 -
Pte3g01130 656 PANTHER CLATHRIN ASSEMBLY PROTEIN 5 596 IPR045192 GO:0048268|GO:0072583
Pte3g01130 656 MobiDBLite consensus disorder prediction 402 417 - -
Pte3g01130 656 Pfam ANTH domain 209 367 IPR011417 GO:0005543
Pte3g01130 656 Pfam ANTH domain 31 153 IPR011417 GO:0005543
Pte3g01130 656 Gene3D ANTH domain 230 378 IPR014712 GO:0005545|GO:0030136|GO:0030276|GO:0048268
Pte3g01130 656 SUPERFAMILY GAT-like domain 237 367 - -
Pte3g01130 656 CDD ANTH_N_AP180_plant 32 151 - -
Pte3g01130 656 FunFam putative clathrin assembly protein At2g25430 232 377 - -
Pte3g01130 656 ProSiteProfiles ENTH domain profile. 24 160 IPR013809 -
Pte3g01130 656 SMART enth_2 30 160 IPR013809 -
Pte3g01130 656 MobiDBLite consensus disorder prediction 162 199 - -
Pte3g01130 656 MobiDBLite consensus disorder prediction 366 422 - -
Pte3g01130 656 MobiDBLite consensus disorder prediction 366 385 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte3g01130 Pte-Chr3 9645087 9648418 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte3g01130 - - qsa:O6P43_019448 994.571
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte3g01130 3 9645087 9648418 Pte3g01130 3 9645087 9648418 RCT