Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte3g01112 ATGGACTACAACAACTCCACTGTTGGTTCTGCTAGTGGGTCGGCTGGGAGGACATTTGAATTTGGAAGGACATATGTGGTCAGGCCAAAAGGCAGACACCAAGCAACTATAGTTTGGCTACATGGCTTAGGTGACAAAGGCTCAAGCTGGTCTCAACTCTTGGAATCCCTTCCTCTTCCAAATATTAAGTGGATCTGTCCTACTGCTCCCACTAGACCCGTAGCAGTATTTGGTGGATTTCCCTGCACTGCCTGGTTTGATGTTGGAGATCTGTCAGAAGATGTTCCTGATGACTTGGAGGGTTTAGATGCATCAGCAGCACACGTTGCCAATCTGTTGTCAACAGAGCCTTCTGATATCAAACTTGGAATTGGGGGCTTTAGCATGGGTGCTGCAACTGCTCTCTACTCAGCTACCTGTTGTGTTTTGGGGCATTATGGGAATCGAAACATCTATCCTGTCAATCTAAGTGCAGTTGTTTCTTTAAGCGGCTGGCTTCCATGTTCAAGGTTTCTGCTCTACTTTCTTCTTCTTGTTGTTTCTCTGACTAGAAAATAA 558 0.457 MDYNNSTVGSASGSAGRTFEFGRTYVVRPKGRHQATIVWLHGLGDKGSSWSQLLESLPLPNIKWICPTAPTRPVAVFGGFPCTAWFDVGDLSEDVPDDLEGLDASAAHVANLLSTEPSDIKLGIGGFSMGAATALYSATCCVLGHYGNRNIYPVNLSAVVSLSGWLPCSRFLLYFLLLVVSLTRK* 186
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte3g01112 185 Pfam Phospholipase/Carboxylesterase 25 169 IPR003140 GO:0016787
Pte3g01112 185 SUPERFAMILY alpha/beta-Hydrolases 25 170 IPR029058 -
Pte3g01112 185 Gene3D alpha/beta hydrolase 16 174 IPR029058 -
Pte3g01112 185 PANTHER ALPHA/BETA-HYDROLASES SUPERFAMILY PROTEIN 1 172 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte3g01112 Pte-Chr3 9509232 9514521 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte3g01112 1 172 Acyl Lipid Metabolism Gene Families AT5G20060 72.093 1.36e-92 268
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte3g01112 K06130 - qsa:O6P43_015669 318.546
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte3g01112 3 9509232 9514521 Pte3g01112 3 9509232 9514521 RCT
Pte3g01112 3 9509232 9514521 Pte1g02362 1 44404125 44408725 RCT