Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte3g01049 ATGGATCAGAAACTGGATCTTAGCTCTCCGCATTCTATGGGAACCACCATCATCGGCGTTACTTACGATGGTGGAGTCGTTCTCGGAGCCGACTCTCGAACGAGCACAGGAGTATATGTTGCAAACAGGGCATCAGATAAGATTACCCAGCTCACTGATAATGTCTATGTTTGTCGCTCTGGATCGGCAGCTGATTCTCAGATAGTGTCTGACTATGTTCGACATTTTCTTCATCAACACACGATACAGCTTGGACAACCGGCCACAGTCAAAGTTGCTGCAAATTTAGTCAGGCTTCTATCTTACAACAACAAGAACTTTCTTCAGACTGGCCTTATTGTTGGTGGCTGGGACAAATATGAAGGTGGTAAAATTTATGGAATTCCATTGGGTGGAACAATTATAGAGCAGCCTTTTGCTATTGGAGGATCTGGATCGAGTTACTTGTATGGATTTTTCGATCAAGCATGGAAAGAAGGAATGACCAAGGAAGAAGCTGAGCAATTAGTAGTTAAGGCAGTCTCCCTTGCTATTGCTCGTGATGGTGCTAGTGGCGGTGTCGTCCGCACTGTGATCATAAATTCTGAGGGAGTCACAAGAAACTTTTACCCTGGCGACAAACTTCCACTGTGGCACGAGGAGATGGAGTCCCAAAATTCACTGTTGGATATATTGAGTGCTCCCAGTCCCAGTCCTGAACCAATGAGCGTGTGA 714 0.4552 MDQKLDLSSPHSMGTTIIGVTYDGGVVLGADSRTSTGVYVANRASDKITQLTDNVYVCRSGSAADSQIVSDYVRHFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGLIVGGWDKYEGGKIYGIPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARDGASGGVVRTVIINSEGVTRNFYPGDKLPLWHEEMESQNSLLDILSAPSPSPEPMSV* 238
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte3g01049 237 SUPERFAMILY N-terminal nucleophile aminohydrolases (Ntn hydrolases) 10 216 IPR029055 -
Pte3g01049 237 Gene3D Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 15 214 IPR029055 -
Pte3g01049 237 PRINTS Proteasome component signature 143 154 IPR000243 GO:0004298|GO:0005839|GO:0051603
Pte3g01049 237 PRINTS Proteasome component signature 154 165 IPR000243 GO:0004298|GO:0005839|GO:0051603
Pte3g01049 237 PRINTS Proteasome component signature 179 190 IPR000243 GO:0004298|GO:0005839|GO:0051603
Pte3g01049 237 PRINTS Proteasome component signature 22 37 IPR000243 GO:0004298|GO:0005839|GO:0051603
Pte3g01049 237 CDD proteasome_beta_type_6 15 202 - -
Pte3g01049 237 ProSiteProfiles Proteasome beta-type subunit profile. 14 193 IPR023333 -
Pte3g01049 237 PANTHER METALLOPROTEASE TLDD 6 209 IPR023333 -
Pte3g01049 237 Pfam Proteasome subunit 13 193 IPR001353 GO:0005839|GO:0051603
Pte3g01049 237 ProSitePatterns Proteasome beta-type subunits signature. 18 65 IPR016050 GO:0005839|GO:0051603
Pte3g01049 237 FunFam Proteasome subunit beta 15 214 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte3g01049 Pte-Chr3 8924790 8928397 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte3g01049 K02738 - qsa:O6P43_015562 438.343
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte3g01049 3 8924790 8928397 Pte3g01049 3 8924790 8928397 RCT