Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte3g01030 ATGGACTCTCAGGACCACAATAAGTCTTCCTTCTCTGCTTCTCCAACCGCCGCTAACAAGTCTGTCTTTGCTCACGTCGTCCGTGCTCCCGAAGATCCTATTCTCGGGGTGACTGTTGCATATAACAAAGATCCAAGTCCGATCAAGCTAAACTTGGGTGTAGGTGCTTATCGAACAGAGGAAGGTAAACCTCTTGTTTTGAATGTTGTGAGACGAGCAGAACAACAGCTGGGGAACGATGTTTCGCGCAACAAAGAGTATCTTGGAATTGTGGGGTTGCCAGAGTTTAACAAATTGAGTGCCAGGCTCGTACTCGGTGTTGACAGTCCTGCCATTCAAGATAACAGGGTTACCACTGTACAATGTTTATCTGGAACTGGATCATTGCGAGTTGGTGGAGAGTTTTTGGCAAGACACTACCATGAACGTATTATATACATTCCTCAACCTACATGGGGAAACCACCCTAAAATTTTTACGTTGTCAGGGTTATCTGTAAAAAGCTACCGCTATTATGCTCCAGCAACACGTGGACTGGACTTTCAAGGCCTCATGGAAGATCTTGGTTCTGCCCCATCTGGAGCTATTGTGCTCCTTCATGCATGTGCACATAATCCCACTGGTGTTGACCCATCGCTTGAACAGTGGGAGCAGATCAGAAAATTGATAAGATCAAAGGCTTTGCTACCTTTCTTTGACAGTGCATATCAGGGTTTTGCAAGTGGAATTCTGGATACAGATGCACAATCTGTTCGTTTGTTTGCAGCTGATGGTGGTGAATTGCTCATTGCTCAGAGTTATGCAAAGAACATGGGTCTATATGGAGAACGTGTTGGTGCCCTCAGCATAGTCTGCAGAACAGGCGATGTTGCTAGCAGAGTGGAGAGCCAGCTAAAACTTGTGATCAGGCCAATGTACTCAAATCCACCTATTCATGGTGCATCAATAGTGGCCACCATCCTCAAGGACAGGGATATGTATAATGAATGGATTGTTGAATTGAAAGGAATGGCTGACCGTATTATCAGCATGCGCCAGCAACTGTTTGAAGCCTTGCGTGCCAGAGGTACGCCTGGTGACTGGAGTCATATTATCAAGCAAATTGGGATGTTTACTTTCACAGGATTGAACACTGACCAAGTTGCCTTCATGACTAAGGAGTATCATATATACATGACTTCTGATGGGAGGATTAGCATGGCAGGCCTGAGTTCAAATACCGTTCCTCATCTGGCTGATGCCATACATGCAGCAGTTACTGGAGCTGCCTAA 1272 0.456 MDSQDHNKSSFSASPTAANKSVFAHVVRAPEDPILGVTVAYNKDPSPIKLNLGVGAYRTEEGKPLVLNVVRRAEQQLGNDVSRNKEYLGIVGLPEFNKLSARLVLGVDSPAIQDNRVTTVQCLSGTGSLRVGGEFLARHYHERIIYIPQPTWGNHPKIFTLSGLSVKSYRYYAPATRGLDFQGLMEDLGSAPSGAIVLLHACAHNPTGVDPSLEQWEQIRKLIRSKALLPFFDSAYQGFASGILDTDAQSVRLFAADGGELLIAQSYAKNMGLYGERVGALSIVCRTGDVASRVESQLKLVIRPMYSNPPIHGASIVATILKDRDMYNEWIVELKGMADRIISMRQQLFEALRARGTPGDWSHIIKQIGMFTFTGLNTDQVAFMTKEYHIYMTSDGRISMAGLSSNTVPHLADAIHAAVTGAA* 424
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte3g01030 423 Gene3D - 82 323 IPR015421 GO:0003824
Pte3g01030 423 ProSitePatterns Aminotransferases class-I pyridoxal-phosphate attachment site. 266 279 IPR004838 GO:0003824|GO:0009058|GO:0030170
Pte3g01030 423 PANTHER ASPARTATE AMINOTRANSFERASE 17 420 IPR000796 GO:0006520|GO:0008483
Pte3g01030 423 PRINTS Aspartate aminotransferase signature 197 216 IPR000796 GO:0006520|GO:0008483
Pte3g01030 423 PRINTS Aspartate aminotransferase signature 296 321 IPR000796 GO:0006520|GO:0008483
Pte3g01030 423 PRINTS Aspartate aminotransferase signature 364 382 IPR000796 GO:0006520|GO:0008483
Pte3g01030 423 PRINTS Aspartate aminotransferase signature 228 240 IPR000796 GO:0006520|GO:0008483
Pte3g01030 423 FunFam Aspartate aminotransferase 312 415 - -
Pte3g01030 423 Gene3D Aspartate Aminotransferase, domain 1 26 415 IPR015422 GO:0003824
Pte3g01030 423 Pfam Aminotransferase class I and II 48 415 IPR004839 GO:0009058|GO:0030170
Pte3g01030 423 FunFam Aspartate aminotransferase 82 323 - -
Pte3g01030 423 CDD AAT_like 50 406 - -
Pte3g01030 423 SUPERFAMILY PLP-dependent transferases 20 419 IPR015424 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte3g01030 Pte-Chr3 8799950 8804518 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte3g01030 K14454 - mnt:21390673 741.495
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte3g01030 3 8799950 8804518 Pte3g01030 3 8799950 8804518 RCT