Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte3g01027 ATGGTGAATTCCATGGTGGAAAGAGCCACGAGCGATATGCTCATCGGTCCTGATTGGGCTTTAAACCTCGAGATCTGTGACATACTCAACCATGACCCAGGGCTAGCAAAGGACGTCGTTAAAGGTATAAAGAAGCGGATTGGAAGTAGAAATGCAAAAGTTCAAATTCTTGCCCTAACACTCTTGGAGACGATTGTCAAGAATTGCGGGGACATAGTTCACATGCATGTCGCTGAGAGAGATGTTCTTCATGAGATGGTCAAAATTGCGAAAAAGAGGCACCCCGACTTTCATGTCAAAGAGAAGATACTAGCTCTAATTGACACTTGGCAAGAAGCTTTTGGAGGACCAAGGGCTAGATATCCACAGTATTATTCGACATACCAGGAACTGCTTCGTGCTGGAGCAGTTTTTCCACAGAGGTCTGAGCAATCTGCTCCAGTATTCACTCCTCCTCAAACACGGCCATTGTCATCACACCCACAGAATATTCGGAACACAGATCACCAGCAGGACAGAGCTGAGTCATCTGCGGAACCTGAGTTTCCAACACTGAGTCTGTCCGAAATCCAAAATGCACGTGGTATTTTGGATGTCCTTTCTGAAATGCTTAATGCATTAGATCCAGGGAACAAAGAGGGCCTCAAGCGGGAGGTTATTGTCGATTTGGTGGAACAATGTCGAATGTACAAGCAAAGAGTGGTACACCTTGTCAACTCAACCTCAGATGAATCACTTCTGTGTCAAGGACTAGCTCTGAATGATGACCTGCAGCGTGTACTAGCCAAGCATGAAGCCATTGCTTCAGGAACGTCTATTGACAATCAAGAGGAGAAAACTAATCCTAAATCAATGGGAGCTCTTCTAGACCTTTATGGTCCTCTGGTTGATACTGGTGAAAGCAGCAACCAAACTCAGGAAAGGTCTAATTCAACTATCGGAGCAGGGGATCGCCCATTTAATCAGTTATCTCTTCCTCCACCACCTACAACAAATGGCCCAAACCTTGGTAGCGCGGAACCTACAATTGACCTGCTGAGTGGTGATGACTTTACCTCACCAAAGGCTGAACCTTCACTTGCTCTTGTTCCAGCAGAACAGACGCCCAGTTCTGAGTGTCAGCAAAATGCTGATGTTCCTTTTGATATGTTTGCCGATGGTAATAATGCAACTAGTTCTGTCAATATCCAGCCAACTATTCTTGCTGGCCCGATCAGCTCTACAGATCCACAATTCCAACAGCAGCAGAATTTTGTATCACCTCAAAGGGGATTTTATCCTAATGGAAGTATACCAAATACTGGACCGCCTGGGTATGAGCAATCACAGTACCTTCAGACTGCAGGTACTTCTTTGAATGGTCAGGTTTCTCAACATCTGCAGCAATCTTCACTGACTTATGGAGCTCAAAGCTCAGGATCATTACCACCTCCACCTTGGGAAACTCAGACAATGGATAATGATAGCCCATCAGCTGCCTCTCAATATCCACAACCGCTGCTATTTAATCAGCCAGGTCTGACACATGCACAGAGCGGTGGACATCCTCAAGGGCCTCAACCAATTGGGAATATTCAACCATTCACAGACAGCCATCTGTCTGAAATCAATGGCCAAGTTTCTCCAAGCAATCAACTAGGCTTGCCGTCTCAATCAACGCAAGCACTTCCAGGGCCATATTTGGGAATGGTGCCACAGCAAATGCAAGGTGGTCCAGTTGTGTCCACATATCCTCAACAGATGTATGGCAATCAATTCATGGGATATGGGTATGATCAACAGGGGGCGCAATACCTTCAACAAAGAATGTATGGCCTATCCGTCAATGATAATGGTTTGAGAAATTCCTTGTACCAAGGTTCTAGTTCTTTGCCATCTCGGAAGCCTTCCAAGCCTGAGGATAAGCTTTTCGGAGATCTTGTCGATATGGCAAAACTGAAACCAAAACCCACTCTAGGCTAA 1962 0.4557 MVNSMVERATSDMLIGPDWALNLEICDILNHDPGLAKDVVKGIKKRIGSRNAKVQILALTLLETIVKNCGDIVHMHVAERDVLHEMVKIAKKRHPDFHVKEKILALIDTWQEAFGGPRARYPQYYSTYQELLRAGAVFPQRSEQSAPVFTPPQTRPLSSHPQNIRNTDHQQDRAESSAEPEFPTLSLSEIQNARGILDVLSEMLNALDPGNKEGLKREVIVDLVEQCRMYKQRVVHLVNSTSDESLLCQGLALNDDLQRVLAKHEAIASGTSIDNQEEKTNPKSMGALLDLYGPLVDTGESSNQTQERSNSTIGAGDRPFNQLSLPPPPTTNGPNLGSAEPTIDLLSGDDFTSPKAEPSLALVPAEQTPSSECQQNADVPFDMFADGNNATSSVNIQPTILAGPISSTDPQFQQQQNFVSPQRGFYPNGSIPNTGPPGYEQSQYLQTAGTSLNGQVSQHLQQSSLTYGAQSSGSLPPPPWETQTMDNDSPSAASQYPQPLLFNQPGLTHAQSGGHPQGPQPIGNIQPFTDSHLSEINGQVSPSNQLGLPSQSTQALPGPYLGMVPQQMQGGPVVSTYPQQMYGNQFMGYGYDQQGAQYLQQRMYGLSVNDNGLRNSLYQGSSSLPSRKPSKPEDKLFGDLVDMAKLKPKPTLG* 654
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte3g01027 653 MobiDBLite consensus disorder prediction 143 165 - -
Pte3g01027 653 FunFam TOM1-like protein 2 183 273 - -
Pte3g01027 653 ProSiteProfiles GAT domain profile. 181 269 IPR004152 GO:0035091|GO:0043130
Pte3g01027 653 MobiDBLite consensus disorder prediction 454 558 - -
Pte3g01027 653 SUPERFAMILY GAT-like domain 142 270 - -
Pte3g01027 653 SUPERFAMILY ENTH/VHS domain 3 139 IPR008942 -
Pte3g01027 653 MobiDBLite consensus disorder prediction 143 182 - -
Pte3g01027 653 MobiDBLite consensus disorder prediction 423 442 - -
Pte3g01027 653 ProSiteProfiles VHS domain profile. 9 139 IPR002014 GO:0035091|GO:0043130
Pte3g01027 653 PANTHER TOM1-LIKE PROTEIN 1 648 IPR044836 GO:0035091|GO:0043130|GO:0043328
Pte3g01027 653 MobiDBLite consensus disorder prediction 614 637 - -
Pte3g01027 653 MobiDBLite consensus disorder prediction 293 356 - -
Pte3g01027 653 SMART VHS_2 2 135 IPR002014 GO:0035091|GO:0043130
Pte3g01027 653 FunFam TOM1-like protein 2 1 149 - -
Pte3g01027 653 MobiDBLite consensus disorder prediction 454 557 - -
Pte3g01027 653 MobiDBLite consensus disorder prediction 297 318 - -
Pte3g01027 653 Pfam VHS domain 3 131 IPR002014 GO:0035091|GO:0043130
Pte3g01027 653 Gene3D - 184 275 IPR038425 -
Pte3g01027 653 Gene3D - 1 157 IPR008942 -
Pte3g01027 653 CDD VHS 2 133 - -
Pte3g01027 653 CDD GAT_GGA-like_plant 189 267 - -
Pte3g01027 653 Pfam GAT domain 197 269 IPR004152 GO:0035091|GO:0043130
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte3g01027 Pte-Chr3 8773919 8789976 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte3g01027 - - cave:132189364 860.136
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte3g01027 3 8773919 8789976 Pte3g01027 3 8773919 8789976 RCT