Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte3g01016 ATGACGTCTATTGCCTCTTCCTCTTCCTCTTCCTCTTCCTACCATCATGACCATCGTCATCCACAAGACAAACCTAGCGAGCCGGTGGCTGAGCGAATTGCACGAGCCCTCAGCCATCCGCTACTCCTCCTGCACCGCACAGACTCAGTTTTCTTCATATTAGGTGCCACCCGAAATGTGTACACTGTGACCCTGTCATCCACACCTACATGCACATGTCCTGATCACACAACTCCATGCAAGCACATCCTATTTGTCTACCTCAGAGTTCTGGGGATGTCTCAGGACGATACATGCATTCGAAGGAAGATCCTTAGGCCATGTCAGCTTAGCCGTATGCTCAAAATGCCCACCTTGCCGGATGCTGTTGCGGGAATAACCCTTCGTGAAAGGTTTCACCAGCAATACATTCAGATGAAGCAGGGTTGTTTGGCAAAAGTCATTAAGATAGAGGAGAAAGGAATAACCTGTCCGGTTTGTCTCGAAGAGATGAAGAAAGAAAAGAAGGCTATGGCTTGTGGGACATGCCGGAACCCTATCCATGAAGAATGCTTGGTGAGGTGGAAGAGAAGTAGAGGGAGCGGGTCAGTTTGTTGTGTGATATGCAGGTCACCGTGGAGGGATAGGACAGATCAGGAAAAGTATCTAAATCTTTCAGCTTACGTCAGTGAGGATGATTTTGCAGATGCCAATGATGGTATCAACGTCCCAAGTACTTACAACTTTGTGCAGGCTGATTAG 741 0.4804 MTSIASSSSSSSSYHHDHRHPQDKPSEPVAERIARALSHPLLLLHRTDSVFFILGATRNVYTVTLSSTPTCTCPDHTTPCKHILFVYLRVLGMSQDDTCIRRKILRPCQLSRMLKMPTLPDAVAGITLRERFHQQYIQMKQGCLAKVIKIEEKGITCPVCLEEMKKEKKAMACGTCRNPIHEECLVRWKRSRGSGSVCCVICRSPWRDRTDQEKYLNLSAYVSEDDFADANDGINVPSTYNFVQAD* 247
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte3g01016 246 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 145 229 IPR013083 -
Pte3g01016 246 MobiDBLite consensus disorder prediction 13 28 - -
Pte3g01016 246 PANTHER RING FINGER AND SWIM DOMAIN-CONTAINING PROTEIN 2 19 213 IPR039903 GO:0061630
Pte3g01016 246 Pfam SWIM zinc finger 61 89 IPR007527 GO:0008270
Pte3g01016 246 MobiDBLite consensus disorder prediction 1 28 - -
Pte3g01016 246 ProSiteProfiles Zinc finger RING-type profile. 157 203 IPR001841 -
Pte3g01016 246 Pfam Ring finger domain 156 203 IPR001841 -
Pte3g01016 246 ProSiteProfiles Zinc finger SWIM-type profile. 61 91 IPR007527 GO:0008270
Pte3g01016 246 SUPERFAMILY RING/U-box 150 216 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte3g01016 Pte-Chr3 8695591 8696331 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte3g01016 - - qsa:O6P43_015491 313.153
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte3g01016 3 8695591 8696331 Pte3g01016 3 8695591 8696331 RCT