Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte3g01009 ATGGCGGTAGACAGAGAACTAGGGCATGGGGTTCTTGACTCTGGTATGAGGCCTCAGACTGCAAGCATGGCTACCGATGCAGAAGTTGATGATGATGGCAGACCCAAACGAACCGGGACTGTATGGACTGCTAGCGCACATATACTCACTGCAGTAGTAGGGGCTGGGGTACTGTCGCTACCTTGGGCTCTGTCACAGTTGGGATGGCTCATCGGTTTAATCACTCTAGTGTTTTTCACAGCAGTAACACTTTATACTTCGAGTCTTTTAGCAGATTGTTATAGATCACCTGATCCAGTAATTGGCAAGAGGAATCACTCCTACATGGAAGCTGTTCAAAACATCTTAGGAGGAAGACAGTACATATTTTTGGGGTTAGTGCAATACATCAGTCTTTTCGGATCTGCCATCGGCTACACAATAACTACAGCTACGAGCTTGGTGGCTATAAAGAAATCTAATTGTTTTCATGAAAGAGGGCATAATGCGCCATGCAGATTTGCCTATAATCCTTATATAATTGGGCTAGGAATAGCTGAAATATTCTTCTCCCAAATCCCCAACTTCCATGAGCTGTCATGGCTTTCAACCATTGCAGCACTCACCTCTTTTGGGTACACATTTATTGGAGTTGGACTTTCTCTTGCTCAAGTCATCTTGGGAAAAGGAAAGAGTACCTCCTTCACTGGGATGAGCATGGCTCCGAACACAACAAAAGCCCATAAAATCTGGTCAATGCTTGTCGCTTTTGGAAATATTGCTCTTGCTTCCTCATATACTTTAATTGCAGTTGACATCCAGGACACCTTGAGGTCATCACCGCCTGAAAATGTGGTAATGAAGACGGCAAACAAGATGGGGCTAACAGTGATGTTATTTCTCTTCATCCTATGTGGTTCTTCTGGCTATGCTGCATTCGGAGATGAAACGCCAGGCAACATCTTAACGGGGTTCGGGTTCTACGAGCCTTTCTGGTTGGTTGATTTGGCCAATGTTCTTATCGTAGTGCATCTAGTGGGAGCATATCAGGTACTTGCTCAACCAGTATACAGTCTGGTTGAGAAATATGCTGCTCTGAAGTGGCCAAAATCGAAGTTTATTACAAGTGAATATCCAATGGTTTTTGGCAAAGTGAAATTCAGAGTCAATTTTTTTAGACTGACATGGAGAACGGTATATGTGATGGTGGGGACAGTGCTGGCTATGGCAATGCCCTTTTTCAATGCAATGCTTGCACTTCTTGGAGCCATTGGCTTCTGGCCTCTCGTGGTATATTTCCCTGTGCAGATGCACATAGCTCAGAATAAGATAGAAAAACGAACATTCAAGTGGTTTGGACTTGAAATCTTGAATTTGGTGAGCTTCTTTGTTTCGTTGGCTGCAGCATGCTCTGCCATCTATGATTTGAGCAGTGCTATTAGAAAGATTGAACCTTTCAATTACAAAGCTTAG 1452 0.4366 MAVDRELGHGVLDSGMRPQTASMATDAEVDDDGRPKRTGTVWTASAHILTAVVGAGVLSLPWALSQLGWLIGLITLVFFTAVTLYTSSLLADCYRSPDPVIGKRNHSYMEAVQNILGGRQYIFLGLVQYISLFGSAIGYTITTATSLVAIKKSNCFHERGHNAPCRFAYNPYIIGLGIAEIFFSQIPNFHELSWLSTIAALTSFGYTFIGVGLSLAQVILGKGKSTSFTGMSMAPNTTKAHKIWSMLVAFGNIALASSYTLIAVDIQDTLRSSPPENVVMKTANKMGLTVMLFLFILCGSSGYAAFGDETPGNILTGFGFYEPFWLVDLANVLIVVHLVGAYQVLAQPVYSLVEKYAALKWPKSKFITSEYPMVFGKVKFRVNFFRLTWRTVYVMVGTVLAMAMPFFNAMLALLGAIGFWPLVVYFPVQMHIAQNKIEKRTFKWFGLEILNLVSFFVSLAAACSAIYDLSSAIRKIEPFNYKA* 484
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte3g01009 483 PANTHER OS05G0424000 PROTEIN-RELATED 39 465 - -
Pte3g01009 483 Pfam Transmembrane amino acid transporter protein 37 467 IPR013057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte3g01009 Pte-Chr3 8611271 8614033 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte3g01009 28 480 Organic Solute Cotransporters AT1G10010 53.611 0.0 513
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte3g01009 K24917 - qsa:O6P43_019494 620.157
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte3g01009 3 8611271 8614033 Pte3g01009 3 8611271 8614033 RCT