Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte3g00996 ATGGCTATTGATCAGTTTCAAAAGAACAGCTTCTACGTAGAAAACCCAGAAGCATTTGAGAATGGTGGGGTGACAAAAAACTTTGACGACGATGGTCGAGTTAGAACGGGGACATGGGTGACAGCCAGTGCCCATATCATAACTGCTGTGATTGGTTCCGGTGTGCTGTCACTGGCATGGGCTATCGCTCAGTTGGGTTGGGTGGCTGGTCCTGCAGTTCTCATGGCCTTCTCTCTTATCACCTACTTCACCTCCACTCTTCTTGCAGACTGCTACCGCTCCCCTGACCCCGTCACTGGAAAACGTAACTACACCTATATGGGTGTTGTTAGGGCAGTCTTAGGAGGAAGAAAAGTTCAGATGTGTGGGTTGGCTCAATATGCGAACCTTGTAGGGGTAACCATTGGTTACACCATAACTGCATCAATTAGTATGGTGGCGGTGGGAAGGTCCAATTGTTTTCACAAACATGGCCATCATGCAAAATGCTATATATCAAATAACCCTTTCATGATCATCTTCGCCGTCATCCAAATTATACTTAGCCAAATACCGAATTTCCACAAGCTCTCCTGGCTTTCAATTGTTGCAGCAATCATGTCTTTCGCTTATTCCTCCATCGGCCTCGGTTTATCCGTGGCTAAAGTAGCAAGTGGCCCTCACGCACGCACATCCTTAACTGGTGTGACAATTGGTGTAGACGTGACTAGCTCTGAGAAAGTTTGGGGAGCATTTCAAGCTTTAGGTGACATTGCTTTTGCATATGCCTACACTAATGTACTCGTCGAAATACAGGACACTCTCAAGTCAAGCCCCCCAGAGAACAAAGTCATGAAGAGAGCAAGCTTAATCGGTGTTTCAACAACCACTGTATTCTATATGTTGTGTGGATGCGTTGGTTATGCAGCATTTGGAAATGATGCACCAGGAAATTTCCTTACTGGATTTGGCTTCTATGAACCATTTTGGCTCGTCGATTTTGCTAACGTTTGCATAGCAGTACATCTCATTGGGGCATACCAGGTCTTCTGCCAACCAATCTTTAGCTTCGTAGAGGGGTCCGCAAGAAGTCGCTGGCCAAACAGCCAATTCATTAACGCAGAGCACTCTGTCAGCATTCCGTTCTGTGGAGGTTACTCCATGAACTTCTTCAGGTTGGTGTGGAGGACTGCATACGTGGTGGTGACTGCTGTTATTGCAATGATCTTCCCATTCTTTAACGACTTTTTGGGACTCATTGGATCAATATCATTTTGGCCATTGACCGTGTACTTCCCAATTGAGATGTACATCAAGCAGACCAAAATGAAGAGATTTTCATTCACCTGGACGTGGCTGAAAATTCTGAGTTTTGCTTGTTTGATAGTTTCCTTCATTTCAGCTGCTGGATCCATCCAAGGCCTGGCCACACATCTCAGGAAATACAAGCCCTTCGCAGCTGAGCAATAA 1449 0.4569 MAIDQFQKNSFYVENPEAFENGGVTKNFDDDGRVRTGTWVTASAHIITAVIGSGVLSLAWAIAQLGWVAGPAVLMAFSLITYFTSTLLADCYRSPDPVTGKRNYTYMGVVRAVLGGRKVQMCGLAQYANLVGVTIGYTITASISMVAVGRSNCFHKHGHHAKCYISNNPFMIIFAVIQIILSQIPNFHKLSWLSIVAAIMSFAYSSIGLGLSVAKVASGPHARTSLTGVTIGVDVTSSEKVWGAFQALGDIAFAYAYTNVLVEIQDTLKSSPPENKVMKRASLIGVSTTTVFYMLCGCVGYAAFGNDAPGNFLTGFGFYEPFWLVDFANVCIAVHLIGAYQVFCQPIFSFVEGSARSRWPNSQFINAEHSVSIPFCGGYSMNFFRLVWRTAYVVVTAVIAMIFPFFNDFLGLIGSISFWPLTVYFPIEMYIKQTKMKRFSFTWTWLKILSFACLIVSFISAAGSIQGLATHLRKYKPFAAEQ* 483
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte3g00996 482 FunFam Amino acid permease 6 32 472 - -
Pte3g00996 482 PANTHER OS05G0424000 PROTEIN-RELATED 38 464 - -
Pte3g00996 482 Pfam Transmembrane amino acid transporter protein 35 468 IPR013057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte3g00996 Pte-Chr3 8522433 8527614 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte3g00996 7 480 Organic Solute Cotransporters AT5G49630 76.618 0.0 751
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte3g00996 K24917 - gmx:100777963 822.772
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte3g00996 3 8522433 8527614 Pte3g00996 3 8522433 8527614 RCT