Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte3g00583 ATGACCGTGGTGACCGTGTTCGTTGCCGCAACCAAGCTCGCTGGTGTTTTGGCGACAATCACCGTTGCAGCGAATGCCGTCTCCTTCTCCCGCTTCCGGAGACGAAACCTCCTCCCATTCCGGTCACCAATCAATGAGTCCTCAGACACTCTCGCGACTTTCAATATCGACGTTGATGGAGAGAATGGTTTTTTCTTTGGGCTAGCAACTGCACCAGCACATGTTGAAGACAGGCTTGATGATGCTTGGGTGCGGTTTGCAGAAGAAATCCCGGACACAGAGTCACAACATTCAAGGCAACCAGCGGATGCTGTGATGGGTTCTGCTGGCGCTGATGGCGGGGCTCAGCAAGGTTCAGTAGGGTCTCAAAAGAGTGCTGATAACAGTGTCAAGAAGACTATGAAGAAGCCTCTGAAGGTAGCTATGGAAGCAATGATTAGGGGATTTGAGAAGTATATAGAAGGAGAAGAAAAAGATCAAAAGGAAAAAGTTGAAGAAGCGGCGATGAAAGAAGAAGGCCATAACGTGGCTGCATGGCACAATGTTCCTGATCCGAAAGAGAGGCTAAGGTTTTGGTCTGACCCTGATACTGAATTGAAGTTGGCCAAGGATACTGGCATCACCGTATTTAGGATGGGGATAGATTGGTCAAGGGTCATGCCTGTGGAGCCTTTGAATGGCCTAAAAGAATCAGTAAATTATGCTGCATTGGAGCGCTATAGATGGATTGTCAATAGGGTCCGATCATATGGAATGAAGGTGATGATGACTCTTTTTCACCACTCATTGCCTCCTTGGGCTGGTGAATATGGAGGATGGAAGCTTGAAAAAACAGTGGATTATTTTATGGATTTCACCAGGCTTGTTGTCGACAATCTATCTGACCTAGTAGAGTATTGGGTTACATTTAATGAACCCCATGTCTTCTGCATGCTAACTTACTGTGCGGGTGCTTGGCCTGGTGGACATCCTGATATGCTCGAGGTTGCAACTTCTGCCCTACCAATTGGTGTTTTCCAACAGACCATGCATTGGATGGCTACTGCACATTCAAAAGCATATGATTATATTCATAATCAAAGCATCACTTCAAATCCGATGGTTGGAGTAGCACACCATGTTTCGTTTATGAGACCCTATGGTCTATTTGATGTTGCTGCAGTTACAGTGGCTAATTCCTTGACCGTCTTTCCTCATGTGGATAATATTTCTGATAAGCTGGATTTTATAGGCATAAACTACTACGGTCAGGAAGTGGTCTGTGGTCATGGATTGAAGCTAGTAGAGAATGATGAGTACAGTGAATCTGGACGCGGTGTCTACCCTGATGGTCTGTATCGCATGTTGCTTCAGTTCCATGAACGATATAAACATCTGGGTGTACCCTTCATTATTACTGAGAATGGAGTTTCAGATGAGACAGATTTGATCCGTCGGCCATACATCTTGGAACATTTACTTGCTGTTTATGCAGCTATGATTAAGGGTGTCCCTGTCCTTGGTTACCTGTTTTGGACAACGAGTGATAATTGGGAGTGGGCTGATGGTTATGGCCCTAAGTTTGGACTTGTAGCAGTTGACAGAGCTAATGGGCTTGCTCGCATTCCACGTCCTTCTTACCACCTATTTTCTAAAGTTGTAACTACAGGTAAAGTAACACAAAAAGATCGAATACAAGCATGGAATGAACTCCAAGAAGCTGCTAAAGATAAAAAGACAAGACCATTTTATCGTGCGGTGGACAAACATGGCCTCATGTATGCAGGAGGTCTTGATGAACCAATATATCGACCTTTCATCGAACGAGATTGGCGATTTGGACACTACGAGATGGATGGTCTGCAAGATCCATTAAGCCGATTGTCAAGATTTTTTCTGAAGCCCTTCTCCTTCAAACGGAAAAGGAAAAATCAAAATGACAATCCAGAATTAGTTCTTCAGCCATTGATAGCTTCCTAA 1959 0.4456 MTVVTVFVAATKLAGVLATITVAANAVSFSRFRRRNLLPFRSPINESSDTLATFNIDVDGENGFFFGLATAPAHVEDRLDDAWVRFAEEIPDTESQHSRQPADAVMGSAGADGGAQQGSVGSQKSADNSVKKTMKKPLKVAMEAMIRGFEKYIEGEEKDQKEKVEEAAMKEEGHNVAAWHNVPDPKERLRFWSDPDTELKLAKDTGITVFRMGIDWSRVMPVEPLNGLKESVNYAALERYRWIVNRVRSYGMKVMMTLFHHSLPPWAGEYGGWKLEKTVDYFMDFTRLVVDNLSDLVEYWVTFNEPHVFCMLTYCAGAWPGGHPDMLEVATSALPIGVFQQTMHWMATAHSKAYDYIHNQSITSNPMVGVAHHVSFMRPYGLFDVAAVTVANSLTVFPHVDNISDKLDFIGINYYGQEVVCGHGLKLVENDEYSESGRGVYPDGLYRMLLQFHERYKHLGVPFIITENGVSDETDLIRRPYILEHLLAVYAAMIKGVPVLGYLFWTTSDNWEWADGYGPKFGLVAVDRANGLARIPRPSYHLFSKVVTTGKVTQKDRIQAWNELQEAAKDKKTRPFYRAVDKHGLMYAGGLDEPIYRPFIERDWRFGHYEMDGLQDPLSRLSRFFLKPFSFKRKRKNQNDNPELVLQPLIAS* 653
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte3g00583 652 ProSitePatterns Glycosyl hydrolases family 1 active site. 463 471 IPR018120 -
Pte3g00583 652 MobiDBLite consensus disorder prediction 91 132 - -
Pte3g00583 652 SUPERFAMILY (Trans)glycosidases 167 554 IPR017853 -
Pte3g00583 652 PRINTS Glycosyl hydrolase family 1 signature 475 486 IPR001360 GO:0004553|GO:0005975
Pte3g00583 652 PRINTS Glycosyl hydrolase family 1 signature 406 420 IPR001360 GO:0004553|GO:0005975
Pte3g00583 652 PRINTS Glycosyl hydrolase family 1 signature 520 532 IPR001360 GO:0004553|GO:0005975
Pte3g00583 652 PRINTS Glycosyl hydrolase family 1 signature 463 471 IPR001360 GO:0004553|GO:0005975
Pte3g00583 652 PRINTS Glycosyl hydrolase family 1 signature 496 513 IPR001360 GO:0004553|GO:0005975
Pte3g00583 652 PANTHER GLYCOSYL HYDROLASE 158 393 IPR001360 GO:0004553|GO:0005975
Pte3g00583 652 Pfam Glycosyl hydrolase family 1 401 549 IPR001360 GO:0004553|GO:0005975
Pte3g00583 652 Pfam Glycosyl hydrolase family 1 196 381 IPR001360 GO:0004553|GO:0005975
Pte3g00583 652 Gene3D Glycosidases 148 561 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte3g00583 Pte-Chr3 4573362 4578641 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte3g00583 6 652 Glycoside Hydrolase AT3G06510 60.787 0.0 861
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte3g00583 K21362 - qsa:O6P43_021895 1068.14
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte3g00583 3 4573362 4578641 Pte3g00583 3 4573362 4578641 RCT