Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte3g00496 ATGCAAATGCCTTCTGATGATGTTGCAGCTTTTTCACCATTGAAAATTAGATTGGGCGGTACATTGCAGGATAAAGTCATATATGATACGAAGGATAACCACCAACCATGCCTTCCATTTGTTAGAAATACCTCTGAGATGTTTGGTTTCTCAAATGGGTGCCTACCCATGTATAGATGGGATGAGCTTAATGCCTTCTTTAAGAATGCTGGGGCGAAGGTTATTTTCGGTTTGAATGCTTTGGCTGGAAAACTACTGTTGTCAGATGGTTCTACCACTGGTAACTGGAACTACACGAATGCTGAGTCTTTCATAGAATACACAGTTAGAAAGAACTATACCATCCATGGATGGGAGCTTGGCAACGAACTGAGTGGACATGGAATAGGAGCAAGTATTGCTGCAGATCAATATGCTGCTGACACCACTGCCCTACGGCATATAGTTCAGAAGTTATATGAACAAATTGAGCCAAAGCCATTAGTTATAGCACCTGGTGGCTTCTTTGATGAGAGCTGGATGAAGGAATTCATAAGTAACTCTACGACATCATTAGATGTTGTCACCCATCACATATATAACCTTGGACCAGGAGTTGATACGCATCTGGTTGAAAAGATTCTAGATCCATCGTATCTTGATGGTGAAGCAGACACATTTAGAAAACTTCAAAACACAATTAAGACATCTCCAACTTCAGCAACTTCTTGGGTTGGAGAGGCAGGAGGGGCATATAATAGTGGCCACCATCTTGTGACTAATGCTTTTGTTTTTAGTTTCTGGTTTCTGGATCAACTTGGAATGGCCTCAACATTTGACACTAAAACATACTGCAGACAGAGTTTGATTGGTGGAAACTATGGCTTGCTCAATACAACTACATTTGAACCAAATCCAGACTACTACAGCGCTCTTCTTTGGCACCGATTGATGGGAAGAAATGTACTTCCGACTAGCTTTTCTGGATCCAAAAGTATACGTGCTTATGCACACTGTTCGAAGCTATCTAAAGGGATCACCTTGCTGCTACTCAACCTAGACAACAATACCACCATTGAAGCCCACGTAGTTGTCAACAATACGCTTACCTTGAGGCACAAGCACGTGTTTGGGCACAAGCACAGGTCGCATAGAGCAAAAAACGGTAAGCTACCTCATCGACGATTCACTCAAACAGCAAGAGAAGAATACCATCTTACAGGAAAGGATGGAAATTTGCACAGCCAAACCATGTTGTTAAATGGACATATTTTAACTGTAAATTCAACGGGTGACATACCTTCATTAGAGCCAGTAACTGCAAATCCATTGGATCCAATAAAGGTTGCTCCTTTATCAATTGTATTTGCCCATATACCTAGTATTGTTCTTCCTGCTTGCAAATAG 1386 0.4134 MQMPSDDVAAFSPLKIRLGGTLQDKVIYDTKDNHQPCLPFVRNTSEMFGFSNGCLPMYRWDELNAFFKNAGAKVIFGLNALAGKLLLSDGSTTGNWNYTNAESFIEYTVRKNYTIHGWELGNELSGHGIGASIAADQYAADTTALRHIVQKLYEQIEPKPLVIAPGGFFDESWMKEFISNSTTSLDVVTHHIYNLGPGVDTHLVEKILDPSYLDGEADTFRKLQNTIKTSPTSATSWVGEAGGAYNSGHHLVTNAFVFSFWFLDQLGMASTFDTKTYCRQSLIGGNYGLLNTTTFEPNPDYYSALLWHRLMGRNVLPTSFSGSKSIRAYAHCSKLSKGITLLLLNLDNNTTIEAHVVVNNTLTLRHKHVFGHKHRSHRAKNGKLPHRRFTQTAREEYHLTGKDGNLHSQTMLLNGHILTVNSTGDIPSLEPVTANPLDPIKVAPLSIVFAHIPSIVLPACK* 462
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte3g00496 461 Gene3D Glycosidases 6 309 - -
Pte3g00496 461 FunFam heparanase-like protein 3 2 309 - -
Pte3g00496 461 PANTHER HEPARANASE-RELATED 8 461 - -
Pte3g00496 461 SUPERFAMILY (Trans)glycosidases 8 311 IPR017853 -
Pte3g00496 461 Pfam Glycosyl hydrolase family 79, N-terminal domain 6 267 IPR005199 GO:0016020|GO:0016798
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte3g00496 Pte-Chr3 3938628 3942093 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte3g00496 8 462 Glycoside Hydrolase AT5G61250 49.458 1.36e-154 448
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte3g00496 K07964 - jre:109005442 706.442
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte3g00496 3 3938628 3942093 Pte3g00496 3 3938628 3942093 RCT