Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte3g00484 ATGTCAACTCGGCTCACCTTGAAGGTATCGAGTGAAGAGGCACTTGAAGCTGCTCATGTTTCTCATCCCATGATCACTAGTACTGCTATATCAAAGGATGGTGACTCCAAAAGTTCAGTAGTACCTGCGCAAGAGGAGGATGTTCCGATTAAACGGTCAAATGAGAATTCTGGGGAACGATTCGACAAGGATGGTGAGCAAAGCAGCACTCTCTTTGCGAAGGCAGTCCCTTTATCAATGGAGCAGCTCTGGGACGGGACCATCCAATTAAACCCTTCCGTGTCAGTGTCTATAGTTGCCTTCTTCAGGAGTGGAGAAAGGTTGCCTGATGTCAACTGGCCTAAATCTGTAGAAGTCAAAGGGAAAGTGAAATTGGAAGCTTTTGAGAAATATATTCAAGATCTTCCCCGCTCTCGTAACCGGGGTTTGACGGTGGTCTCTCTCTGCTGGAAACAAGGTTCTTCGAAACCCAAGCTGGAAGGGATGAATAAGGTTGCAAAAAAATACAAGGAAGAAAACAAGGTAGGGTTGGCAAAAGTTTCTCCAGGCCTTGATATTTATGTCTGTCCTCGCAGTGAGACTATAATCACAATACTAGCCAAACATGGTTTCTTCAAAGGCATGACCGCTATTGAAGACAACAAGAACTCCTTAATTGGTTGTGTGGTGTGGCGAAGAAACCAGTCAGATTTGAAATGTGTATCAGACAAATCTGAGAAGAATACTATTATGTCTCAGAAATCTGTCACCACTCCTTCCAGCTTATCTATTCAACGAGAATCTGCAAACAATGTGTCCTGTGCACCCTCTGCTCCGGAGCCCAGTCGAACACAGTCTACAGTTGAGTCAGACATGTCGGAACATAGGGCTGAAAGAGCTGGGCAACATACTAGCTCCAACTCGAACCTCTTGCCCACAAATTCTGTCTTGACCAGTTCCCAATCTCTGTCAGTGGTACCTAAAACAGTATTTTCTCATTCTAAGTCCAAAGTTTTAGGGGAACAATTGTTGAAAGTAAAAGATCCTTTGACGTCTAATTTAGGACAAGAGCGAGATAGGGGGGTGGAATTTCAACAGCCAACATCGATTTTACCATCTGATGTGAAGAACCGAGCTTTACCTGTACTTGACATTGATGATCTTCCTGAATTTGATTTTGGAGCTTCTCGTTGTATTTCACCACCTTTTGCTGAGAAGCCTCTAGCTGCAGTGACATTTGACAAGAAATTCCGAGATGGGGTATCTAGGAACAAGGATGAACTTTTGCAACCTACAGTAACAGTTCCATCTCTAAGTTCGTGGCCAGTTGCGTCTCAAACTCAAAGAAGCGATCTTTTAGTAGTTGCATCGGATGAAACTGAGAAAATGCTTCCAGTGAAGAGAGCTTGTATTCGTGATGGCATTTTGCCTGACATGAAAAATAAACAGAAAATAGCTACGGTAATCGCAGGTAGTATTTCTGGTGGTCCCCGAAGAAGAAACCTTTTCAATGATGGCGACGATGACATGCCAGAATGGTCCCCACCTTGTGTCCTTCCAAAGAATCAGTCACTTGCAAATACTCACATGCCTTATACAAAATCAAATATGTTTTATTCTAGAGAGCCACAGTCAACACCCCATGATTCATCTGCTGTTCCTCGAAGCATCTCTTATCCATTAGCAACTACTGCTCAGCCACCAGTAAATTACCAGGGGTATCAGTCTGCGTCTCGTCACCCCTTTAATTCCGCGCAACATGAAGTAAGACCACTTCAAAGTCCTCTGACTGGAATTGACGGCAAATTCTTGACCCAACATTAA 1803 0.437 MSTRLTLKVSSEEALEAAHVSHPMITSTAISKDGDSKSSVVPAQEEDVPIKRSNENSGERFDKDGEQSSTLFAKAVPLSMEQLWDGTIQLNPSVSVSIVAFFRSGERLPDVNWPKSVEVKGKVKLEAFEKYIQDLPRSRNRGLTVVSLCWKQGSSKPKLEGMNKVAKKYKEENKVGLAKVSPGLDIYVCPRSETIITILAKHGFFKGMTAIEDNKNSLIGCVVWRRNQSDLKCVSDKSEKNTIMSQKSVTTPSSLSIQRESANNVSCAPSAPEPSRTQSTVESDMSEHRAERAGQHTSSNSNLLPTNSVLTSSQSLSVVPKTVFSHSKSKVLGEQLLKVKDPLTSNLGQERDRGVEFQQPTSILPSDVKNRALPVLDIDDLPEFDFGASRCISPPFAEKPLAAVTFDKKFRDGVSRNKDELLQPTVTVPSLSSWPVASQTQRSDLLVVASDETEKMLPVKRACIRDGILPDMKNKQKIATVIAGSISGGPRRRNLFNDGDDDMPEWSPPCVLPKNQSLANTHMPYTKSNMFYSREPQSTPHDSSAVPRSISYPLATTAQPPVNYQGYQSASRHPFNSAQHEVRPLQSPLTGIDGKFLTQH* 601
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte3g00484 600 MobiDBLite consensus disorder prediction 241 307 - -
Pte3g00484 600 MobiDBLite consensus disorder prediction 48 66 - -
Pte3g00484 600 CDD SPOC_TFIIS 83 224 - -
Pte3g00484 600 MobiDBLite consensus disorder prediction 241 281 - -
Pte3g00484 600 PANTHER TRANSCRIPTION FACTOR S-II ZINC FINGER DOMAIN-CONTAINING PROTEIN 70 387 - -
Pte3g00484 600 MobiDBLite consensus disorder prediction 26 66 - -
Pte3g00484 600 Pfam SPOC domain 80 224 IPR012921 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte3g00484 Pte-Chr3 3863191 3868804 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte3g00484 - - qsu:112039054 362.844
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte3g00484 3 3863191 3868804 Pte3g00484 3 3863191 3868804 RCT