Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte3g00460 ATGAGATCGGGCAGACATTCTAAGAGAAGAAGCCGACAGTCCTCGCCGGTCAAGGATAGAACGACTGTTTCACCCTCTGGATTCGACACAGATTCAACCTCTAACGGGACTCCTTCGTCTTCCAAACTCACAGCTTCTACAGCGCTCTTGGACCGAGACCTCGTCACCGAGACTGAAGCAGGCTTTCTGTTTGAAGACCTCCACATTTCAGACTACCGGACCGATTCCAACACGAATCCTCGAAACTTCCCTCACAGTGTGAAGCAGCGATGCTGGGAGAAGGCTGAGAAAGTCAAAGGTCGAGACCCTGAAAGGTGGAGACGAGACGCCCTTGGTAACATCGTCTTCAGGAAGCTCGTAGGTTGCCCAGGCTGTCTTTGTCATGATTATGATCATATTGTGCCATACTCCAAGGGAGGGGAAAGCACTTTGGAAAACTGTCAGGTTTTGCAGGCAACGGTGAATCGTGCCAAGGGGAATCGTACAGAGTTGTCAAGATCTGATCTTATTCAGAAGAGTTCTTATTGTAGGGTTTCAGGTCGTGACATGGATCTTCTTGAGCTGTCTGCATATGGTAACGTCCGACGTGGACAAGAAACTGGGTGGTGTAGAATTCAATGA 621 0.4928 MRSGRHSKRRSRQSSPVKDRTTVSPSGFDTDSTSNGTPSSSKLTASTALLDRDLVTETEAGFLFEDLHISDYRTDSNTNPRNFPHSVKQRCWEKAEKVKGRDPERWRRDALGNIVFRKLVGCPGCLCHDYDHIVPYSKGGESTLENCQVLQATVNRAKGNRTELSRSDLIQKSSYCRVSGRDMDLLELSAYGNVRRGQETGWCRIQ* 207
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte3g00460 206 SMART HNH_5 110 156 IPR003615 -
Pte3g00460 206 Pfam HNH endonuclease 128 161 IPR002711 GO:0003676|GO:0004519|GO:0008270
Pte3g00460 206 MobiDBLite consensus disorder prediction 1 43 - -
Pte3g00460 206 MobiDBLite consensus disorder prediction 17 43 - -
Pte3g00460 206 Gene3D - 83 178 - -
Pte3g00460 206 PANTHER HNH ENDONUCLEASE 5 206 - -
Pte3g00460 206 CDD HNHc 114 159 IPR003615 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte3g00460 Pte-Chr3 3718878 3721701 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte3g00460 - - jre:108995416 295.049
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte3g00460 3 3718878 3721701 Pte3g00460 3 3718878 3721701 RCT