Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte3g00410 ATGGGTTGTTCATCCAGCACAGAAGCTGACTCGAAATCCAATAGAATTGCTCGCTGGAGATCCACTGGAATTGTTGCTTTACGAGACTTCAAATTGAAGACGTTTCCTAATGAAGTTCTTGACTTGGAGAGATCTGTAAGGACCCTCGATTTGACTCATAATAAAATAGTTGACATTCCTATGGATATCAGCAGATTGGTTAACATGCAACGCCTGATTTTGGCTGATAACTTCATTGAGCGATTACCAATGAATTTTGGGAAACTCCTGTCTGTCAAAGTCATGACCCTGGATAATAACCGAATTGGATCCTTACCTGATGAATTGGGCCATTTGGTGAAGCTTGAGCGGTTATCCATCTCAGGAAACTCACTTACCTACATGCCTCAGACAATCGGCAGCTTGAGAAATCTTTTGCTTTTGAACGTGTCTAATAACAAGCTTAAGAATTTGCCAGAATCGATTGGATGTTGCTCCTCTCTGGAAGAAGTAGAAGCAAATGATAACCTTATTGAAGATCTCCCTGTATCCAGCTGCAATCTTGTTAACCTAAAGTCCCTTTTGTTAAACAACAATAAAATTAATCAGATACCACTGAATCTATTGAAAGAATGCAAGGCTCTGCAGAACATTTCTCTACATGGGAATCCAATATCAATGGAACAGTTTCAACAGATGGAAGGGTTTCAAGAATTTGAAGAGAGGAGAAAAAAGAAGGTCGACAAACAACTAGATTTAAACGTCATGATCAGTTCCAATGGTCTTGATGAAGGTGTGGATCGATATGTCTGA 792 0.3952 MGCSSSTEADSKSNRIARWRSTGIVALRDFKLKTFPNEVLDLERSVRTLDLTHNKIVDIPMDISRLVNMQRLILADNFIERLPMNFGKLLSVKVMTLDNNRIGSLPDELGHLVKLERLSISGNSLTYMPQTIGSLRNLLLLNVSNNKLKNLPESIGCCSSLEEVEANDNLIEDLPVSSCNLVNLKSLLLNNNKINQIPLNLLKECKALQNISLHGNPISMEQFQQMEGFQEFEERRKKKVDKQLDLNVMISSNGLDEGVDRYV* 264
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte3g00410 263 SMART LRR_bac_2 112 131 - -
Pte3g00410 263 SMART LRR_bac_2 158 177 - -
Pte3g00410 263 SMART LRR_bac_2 135 154 - -
Pte3g00410 263 SUPERFAMILY L domain-like 19 219 - -
Pte3g00410 263 ProSiteProfiles Leucine-rich repeat profile. 183 203 IPR001611 GO:0005515
Pte3g00410 263 Gene3D Ribonuclease Inhibitor 129 254 IPR032675 -
Pte3g00410 263 ProSiteProfiles Leucine-rich repeat profile. 137 158 IPR001611 GO:0005515
Pte3g00410 263 PANTHER LEUCINE-RICH REPEAT-CONTAINING 25 219 - -
Pte3g00410 263 Pfam Leucine rich repeat 68 125 IPR001611 GO:0005515
Pte3g00410 263 Gene3D Ribonuclease Inhibitor 3 128 IPR032675 -
Pte3g00410 263 ProSiteProfiles Leucine-rich repeat profile. 45 67 IPR001611 GO:0005515
Pte3g00410 263 SMART LRR_typ_2 66 88 IPR003591 -
Pte3g00410 263 SMART LRR_typ_2 112 134 IPR003591 -
Pte3g00410 263 SMART LRR_typ_2 181 204 IPR003591 -
Pte3g00410 263 SMART LRR_typ_2 89 111 IPR003591 -
Pte3g00410 263 SMART LRR_typ_2 135 158 IPR003591 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte3g00410 Pte-Chr3 3377000 3381888 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte3g00410 90 218 Receptor kinase-like Gene Family AT3G47570 33.088 1.14e-08 53.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte3g00410 - - zju:107419165 370.933
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte3g00410 3 3377000 3381888 Pte3g00410 3 3377000 3381888 RCT