Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte3g00382 ATGTCACGGCAAGGTAGCACTATTGCCACGAGCAAAATGCTGACAGATGGATCACTCTGGAAGTTTGGTACTCTACCCCCCGGTCTGTTAAGAATTTATGGTCTGACAGAGCCACTTGATAGAAGGTGGTATGTGCTAGGATTGGGGTATGATATGAATATCGACAATCGTCTGATTGAAAGTACAGCAGTCATTCATTTTAATGCTCTTGGGAGGCCTTTGGATAATGAGGACCCGAGGGAGTACGCGAGTCGATGTGCAGTTCAGTGGCATCGAGTTTCCGTTTATCCTGAGAATTTGGGTAGGATCGTAATGAAGAATGTTGTTCCTGGTTCAATCTTGTACATGGAGGGTAACTTGGAGACGAAGATATTCAATGATCCAATAACTGGTCTAGTTCGCAGAATCAGAGAGGTTGCTATTCGCCGACATGGTCGCGTTGTCTTCTTGGGTAAAGGTGAAACCCAGCAACACTCACCAAATGAGTTCAAAGGCATTGGCTACTACTAG 510 0.4529 MSRQGSTIATSKMLTDGSLWKFGTLPPGLLRIYGLTEPLDRRWYVLGLGYDMNIDNRLIESTAVIHFNALGRPLDNEDPREYASRCAVQWHRVSVYPENLGRIVMKNVVPGSILYMEGNLETKIFNDPITGLVRRIREVAIRRHGRVVFLGKGETQQHSPNEFKGIGYY* 170
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte3g00382 169 Pfam Glycosyl transferase family 8 13 69 IPR002495 GO:0016757
Pte3g00382 169 Gene3D - 57 150 IPR012340 -
Pte3g00382 169 Pfam Single-strand binding protein family 80 143 IPR000424 GO:0003697
Pte3g00382 169 SUPERFAMILY Nucleic acid-binding proteins 77 144 IPR012340 -
Pte3g00382 169 PANTHER GALACTURONOSYLTRANSFERASE 4-RELATED 12 73 IPR029993 GO:0047262
Pte3g00382 169 SUPERFAMILY Nucleotide-diphospho-sugar transferases 22 82 IPR029044 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte3g00382 Pte-Chr3 3156334 3161748 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte3g00382 18 73 Glycosyltransferase AT2G46480 58.929 5.61e-18 78.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte3g00382 K03111 - cave:132184761 171.014
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte3g00382 3 3156334 3161748 Pte3g00382 3 3156334 3161748 RCT