Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte3g00295 ATGACGACAGCACCGTCTCTGCATGCACCGCCAGATCCCAGGACAACCAGGAAGCTCGTCGTCGAAGTGATCGATGCACGTGACCTTCTTCCCAAGGATGGTCAGGGAAGTTCTAGCCCTTATGTTATTGTTGACTTTGATGGACAGAGAAAGAGGACTTCCACCAAGTATAGAGACTTGAACCCGGTCTGGAATGAGGCTTTGGAGTTCATCGTCTCTGACCCAGAGAATATGGCCGTCGAGGAGCTCGAGATTGAGGTCTTTAATGACAAGCGGTTCGGTAATGGTAGTGGTCGTAAAAACCACTTTCTGGGTCGGGTGAAATTGTATGGATCGCAGTTTGCTAAGAGAGGGGACGAGGGATTGGTTTACTATGCGTTGGAGAAGAAGAGCGTGTTCAGTTGGATAAGGGGTGAGATTGGACTCAGGATTTATTATTACGATGAGTTGGTTGAGGAAGATCAACCGCCGCAACAATCGGAAGAGACCCATCCGCCACCTGAGCCTGAGAAGATGAAGCCCCCTTCTACAGTTGTCGTGGAAGAAGGAAGGGTTTATGAGGTTCCCGCGCCAATGGAGACTTGTGTAGCTGAAGGTCCTCCTTCGCCACCAGTTATGGTTATCGAAGAGTCTCCACCGCCGATGGTCCAGGTACACCAGGAACCACAGTTTCCACCGGAAATTTCCATGCCCATGCCAATGTCCGCAGGACCGCCATGTCCAGAAATTCAGTACCCGCCTGCAGAGGTGAGGAAAATGCAGACAGGGAGATATGGAGGTGGCGAGAGGGTTCGGATTCTGAAGAAACCCACTGGAAATTACTCACCCAGTGTCATTCCCTCCAGGTCTGCCGGGAATGAATCCGAAAGGGTTCATCCATTTGATCTAGTCGAACCGATGCAGTACTTGTTTGTGAGGATAGTCAAGGCTAGAGGTCTCGCTCCAAACGAAAGTCCCTATGTGAAGATACGGACTTCTACTCACCACGTAAGATCCAAACCCGCAAATTACCGACCCGTTGAGCCTATTGATTCTCCAGAATGGAACCAGGTGTTTGCCCTAGGACACAAGTCGGAGTCTGGAAACAATGCGACTCTGGAAATTTCCGTTTGGGATAAGCCGTCACAGCAGTTTCTCGGTGGAGTTTGCTTCGACCTCTCGGACGTGCCAGTGCGTGATCCTCCTGATAGTCCATTGGCTCCACAATGGTATCGGCTAGAAGGCGGCGATGCCGAACAGAATCCCAGCATGGTTTCCGGCGATATCCAACTCTCCATCTGGATAGGTACTCAAGCAGATGACGCATTCCCAGAAGCCTGGAACGCCGACGCTCCGTACGTGGCGCACACTCGTTCCAAAGTTTACCAGTCTCCAAAGCTATGGTATTTGAGAGTGACAGTGATCGAAGCACAAGACCTTCACATCGCTCCGAATTTGCCACCATTGACAGCACCAGAGATCCGGATCAAAGCTCAATTGAGTTTTCAGTCAAACAGAAGCAGACGAGGGTCAATAAACAATCACAGCTCCTCATTTCACTGGAACGAAGATCTCCTTTTCGTTGCCGGAGAGCCTCTTGAGGAATCTTTGATTCTCTTTGTTGAAGATCGTACAAACAAAGATGCTGTGTCGCTGGGCCACATAGTAATTCCAGTGAGCTCCATCGAACAGCGTATCGATGAACGCCATGTTGCTTCCAAGTGGTTCGCGTTGGAAGGAGGAGGCGGCTCCAGTGGAACCTACTGCGGGCGAATTCACCTGAGGCTCTGTTTGGAAGGTGGCTATCACGTGCTGGACGAAGCAGCCCATTTTTGCAGTGACTTTCGGCCCACAGCCAAACAACTCTGGAAGCCCGCCATTGGTATTTTGGAGCTGGGGATATTAGGTGCCCGTGGGCTTTTGCCCATGAAGTCAAAAGGCGGAGGCAAAGGTTCGACCGACGCTTATTGCGTCGCCAAGTATGGAAAGAAATGGGTCAGGACCCGCACCATCCCCGATAGCTTTGACCCACGCTGGAATGAGCAATACACGTGGCAGGTTTATGATCCTTGTACGGTCCTCACCATTGGAGTCTTTGACAACTGGCGTATGTTTGCTGATACAAAAGCAGAAGAGAAGCTAGACAACCGAATTGGCAAAATTCGTATACGGGTTTCTACTTTGGAGAGTAACAAGGTATACACGAATTCATATCCATTGTTAGTGTTATTGAGAAGTGGGTTGAAGAAAATGGGTGAGATTGAGGTAGCGGTTCGGTTTGCCTGCCCATCATTATTACCAGATACTTGTACGGTTTATGGACAGCCATTGCTGCCAAGAATGCACTATCTTCGTCCACTTGGGGTGGCCCAACAAGAGGCCCTTCGTGGGGCTGCGACGAAGACGGTTGCCCAGTGGCTTGCGAGGTCAGAACCACCATTGGGCCATGAGGTGGTTCGGTACATGTTGGATGCGGACTCACATACATGGAGCATGAGGAAGAGTAAGGCGAATTGGTTTCGGATTGTCTCGGTTCTTGCATGGGCAGTCGGTTTGGCAAAATGGTTAGATGATATAAGAAGGTGGAGGAACCCAGTGACGACGGTACTCGTGCACGTGTTGTATTTGGTCCTTGTTTGGTACCCAGATTTGATTGTGCCCACTGGGTTCCTATACGTAGTTTTAATCGGGATATGGTATTATCGGTTTAAGCCCAAGATACCAGCTGGTATGGATACCCGGTTATCACAAGCGGAAACGGTTGACCCGGATGAACTCGATGAAGAGCTTGATACTATACCAAGTTCAGAGCCACCGGACATAATTCGGATCAGGTATGATAGGTTAAGGATGTTAGCTGCAAGAGTCCAGACAGTTTTGGGTGATTTTGCAACCCAAGGTGAGAGGGTCCAAGCCTTGGTGAGTTGGAGGGACCCAAGAGCCACAAAGTTGTTTATAGGGATATGCCTTGCAATCACAATAATACTATACACTGTGCCAGCGAAAATGGTGGCAGTGGCCTTAGGATTCTACTACTTGCGTCATCCCATGTTTAGGGACCCTATGCCTCCAGCAAGCTTGAACTTTTTCCGGCGACTGCCCAGCTTGTCGGACCGGTTAATGTAG 3105 0.4992 MTTAPSLHAPPDPRTTRKLVVEVIDARDLLPKDGQGSSSPYVIVDFDGQRKRTSTKYRDLNPVWNEALEFIVSDPENMAVEELEIEVFNDKRFGNGSGRKNHFLGRVKLYGSQFAKRGDEGLVYYALEKKSVFSWIRGEIGLRIYYYDELVEEDQPPQQSEETHPPPEPEKMKPPSTVVVEEGRVYEVPAPMETCVAEGPPSPPVMVIEESPPPMVQVHQEPQFPPEISMPMPMSAGPPCPEIQYPPAEVRKMQTGRYGGGERVRILKKPTGNYSPSVIPSRSAGNESERVHPFDLVEPMQYLFVRIVKARGLAPNESPYVKIRTSTHHVRSKPANYRPVEPIDSPEWNQVFALGHKSESGNNATLEISVWDKPSQQFLGGVCFDLSDVPVRDPPDSPLAPQWYRLEGGDAEQNPSMVSGDIQLSIWIGTQADDAFPEAWNADAPYVAHTRSKVYQSPKLWYLRVTVIEAQDLHIAPNLPPLTAPEIRIKAQLSFQSNRSRRGSINNHSSSFHWNEDLLFVAGEPLEESLILFVEDRTNKDAVSLGHIVIPVSSIEQRIDERHVASKWFALEGGGGSSGTYCGRIHLRLCLEGGYHVLDEAAHFCSDFRPTAKQLWKPAIGILELGILGARGLLPMKSKGGGKGSTDAYCVAKYGKKWVRTRTIPDSFDPRWNEQYTWQVYDPCTVLTIGVFDNWRMFADTKAEEKLDNRIGKIRIRVSTLESNKVYTNSYPLLVLLRSGLKKMGEIEVAVRFACPSLLPDTCTVYGQPLLPRMHYLRPLGVAQQEALRGAATKTVAQWLARSEPPLGHEVVRYMLDADSHTWSMRKSKANWFRIVSVLAWAVGLAKWLDDIRRWRNPVTTVLVHVLYLVLVWYPDLIVPTGFLYVVLIGIWYYRFKPKIPAGMDTRLSQAETVDPDELDEELDTIPSSEPPDIIRIRYDRLRMLAARVQTVLGDFATQGERVQALVSWRDPRATKLFIGICLAITIILYTVPAKMVAVALGFYYLRHPMFRDPMPPASLNFFRRLPSLSDRLM* 1035
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte3g00295 1034 ProSiteProfiles C2 domain profile. 1 124 IPR000008 -
Pte3g00295 1034 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 302 444 IPR035892 -
Pte3g00295 1034 Gene3D C2 domain 606 754 IPR035892 -
Pte3g00295 1034 ProSiteProfiles C2 domain profile. 441 569 IPR000008 -
Pte3g00295 1034 FunFam C2 domain-containing protein 284 428 - -
Pte3g00295 1034 CDD C2B_MCTP_PRT_plant 302 430 IPR047257 -
Pte3g00295 1034 Gene3D C2 domain 446 592 IPR035892 -
Pte3g00295 1034 CDD C2D_MCTP_PRT_plant 622 750 IPR047255 -
Pte3g00295 1034 Pfam C2 domain 18 113 IPR000008 -
Pte3g00295 1034 Pfam C2 domain 461 571 IPR000008 -
Pte3g00295 1034 Pfam C2 domain 302 404 IPR000008 -
Pte3g00295 1034 Pfam C2 domain 621 733 IPR000008 -
Pte3g00295 1034 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 18 165 IPR035892 -
Pte3g00295 1034 MobiDBLite consensus disorder prediction 153 175 - -
Pte3g00295 1034 Pfam Plant phosphoribosyltransferase C-terminal 879 1034 IPR013583 -
Pte3g00295 1034 CDD C2A_MCTP_PRT_plant 18 148 - -
Pte3g00295 1034 CDD C2C_MCTP_PRT_plant 462 610 IPR047258 -
Pte3g00295 1034 Gene3D C2 domain 13 175 IPR035892 -
Pte3g00295 1034 Gene3D C2 domain 298 445 IPR035892 -
Pte3g00295 1034 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 461 612 IPR035892 -
Pte3g00295 1034 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 621 774 IPR035892 -
Pte3g00295 1034 SMART C2_3c 18 123 IPR000008 -
Pte3g00295 1034 SMART C2_3c 622 730 IPR000008 -
Pte3g00295 1034 SMART C2_3c 302 398 IPR000008 -
Pte3g00295 1034 SMART C2_3c 462 564 IPR000008 -
Pte3g00295 1034 FunFam C2 domain-containing protein 604 757 - -
Pte3g00295 1034 ProSiteProfiles C2 domain profile. 283 404 IPR000008 -
Pte3g00295 1034 ProSiteProfiles C2 domain profile. 604 731 IPR000008 -
Pte3g00295 1034 PANTHER PHOSPHORIBOSYLANTHRANILATE TRANSFERASE ISOFORM 1 18 1034 IPR047259 -
Pte3g00295 1034 MobiDBLite consensus disorder prediction 267 286 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte3g00295 Pte-Chr3 2453626 2457816 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte3g00295 1 1035 Lipid Metabolism Gene Families AT1G74720 72.553 0.0 1575
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte3g00295 - - qsa:O6P43_022804 1784.62
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte3g00295 3 2453626 2457816 Pte3g00295 3 2453626 2457816 RCT