Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte3g00276 ATGAAGAGAGGAAAATTAGGGAAGCTCGATGGTTTTGTTTCACTGAGCAGGAAGAGATCGGTTCAAATTTTGATCGGGGTTGGGCTCTTGTATATGCTATTAGTAACAGTAGAAGTCCCATTTGTTTTCAGAACTGGGTTTAGCTCTATTTCTCAGGAAGCTTTGATTCGTCCTCGTAGACTGGATAGCGAGGCGGAGTTGGAAGAGAAAGAAGCCCCAACTCGGCCTCTAGAACGGGTTTCCGTTAAAGCAAACCAACCGACTCAGGGTCGATTCGCCGATTCTAAAATCCTATCCGGTTTGGTATTTGATGCCAAGACTTTTGATTTGCGTAGAAAAGATGGGTATTCACAGCTCTATGAATCGGCAAAGTATGCTTGGGAAGTGGGGACAAAGTTATGGAAGGACATTAAATCTGGGAATGTTCAAATTGTTACCAAGAAGCCTGACAACCACTCGGTTACTTGTCCTCATTCAATTTCACTCTCTCGGTCTGAGTTTTCTGTTCGTAAGGGAGTCATGGAGATTCCTTGTGGACTGACGTTAGGGTCTCACGTAACGCTTGTTGGAAGACCATCGACTATGCACCCGGAATCTGATCCAAATGATGAATCTTTGGTGGCATCACAGTTTATTCTGGAGTTGCAGGGTTTGAAGACCGTCGAAGGTGAGGCGCCACCTAGGGTTTTGCATTTCAATCCGAGGTTGAAGGGAGATTGGGGTGGCAAGCCTGTGATTGAACTAAACACCTGTTATAGAATGCAGTGGGGACAGGCACTACGATGTGAAGGTTGGAAATCTAAGGCCGATGAAGAGACTGTTGATGGTCAGGTTAAGTGTGAGAAATGGATTCGAGATGACGAGAGTCGTACAGAAGAGACAAAGGCAATATGGTGGTTGAAACGACTTATAGGGCGAACAGAGAAAGTGACCTTTGAATGGCCATTTCCATTCACTGAAGGCAAGCTGTTTGTCCTCACTCTCAGTGCTGGATTGGAGGGTTATCATGTTAATGTTGATGGTCGGCATATTGCCTCTTTTCCTTATCGCATGGGGTACACTCTTGAGGATGCTACTGGATTATTCATAGGTGGAGACATTAGCGTCAAATCCTTATTTGCTGCATCATTGCCTTCATCACATCCTAGTTTTTCTCCTCAACGATACCTTGAATGGTTAGACAAATGGCGTGCTCCACCACTTCCTGATGTTAATGTGGAGTTGTTCATTGGTATCCTTTCTGCTGGAAACCATTTTGCTGAGCGGATGGCTGTTAGGAAATCATGGATGCAGCATGAGCTTATCAAATCGTCAACTGTTGTGGCTCGATTTTTTGTTGCATTGCACTCTAAGGAAGAGGTGAACATGGAGTTAAAGAAAGAAGCGGAGTTCTTTGGCGATATCATTATTGTGCCATACATGGACAACTATGACCTGGTTGTGCTCAAAACAGTAGCCATATGTGAATATGGGGTTAGGACCATTGCTGCCAAGTCTATCATGAAATGTGACGATGACACTTTTGTTAGAGTAGATGCAGTTTTAAGTGAAGCGCAGAAAGTTCCTCGGAATAAAAGCTTTTATGTTGGGAATATAAATTACTACCATAAACCCCTGCGCTATGGTAAATGGGCAGTAACATATGAGGAATGGCCTGAAGAGAATTATCCACCATATGCCAATGGACCTGGCTATATATTGTCATTTGACATCGCAAGGTTTATTGTGTCCGAATTTGAGAGACATGAATTGAGGTTGTTCAAGATGGAAGATGTGAGCATGGGCATGTGGGTGGAGCAATTCAACAGTTCAAAGTCAGTAGATTATTTCCATAGTCTGAAGTATTGTCAGTACGGCTGTGTAGAGAATTATGTGACAGCACATTATCAATCCCCAAGACAGATGTTATGCCTATGGGATAAGTTGCAGAAGGAGGGAAAGCCTCAGTGCTGCAACATGAGATGA 1965 0.4366 MKRGKLGKLDGFVSLSRKRSVQILIGVGLLYMLLVTVEVPFVFRTGFSSISQEALIRPRRLDSEAELEEKEAPTRPLERVSVKANQPTQGRFADSKILSGLVFDAKTFDLRRKDGYSQLYESAKYAWEVGTKLWKDIKSGNVQIVTKKPDNHSVTCPHSISLSRSEFSVRKGVMEIPCGLTLGSHVTLVGRPSTMHPESDPNDESLVASQFILELQGLKTVEGEAPPRVLHFNPRLKGDWGGKPVIELNTCYRMQWGQALRCEGWKSKADEETVDGQVKCEKWIRDDESRTEETKAIWWLKRLIGRTEKVTFEWPFPFTEGKLFVLTLSAGLEGYHVNVDGRHIASFPYRMGYTLEDATGLFIGGDISVKSLFAASLPSSHPSFSPQRYLEWLDKWRAPPLPDVNVELFIGILSAGNHFAERMAVRKSWMQHELIKSSTVVARFFVALHSKEEVNMELKKEAEFFGDIIIVPYMDNYDLVVLKTVAICEYGVRTIAAKSIMKCDDDTFVRVDAVLSEAQKVPRNKSFYVGNINYYHKPLRYGKWAVTYEEWPEENYPPYANGPGYILSFDIARFIVSEFERHELRLFKMEDVSMGMWVEQFNSSKSVDYFHSLKYCQYGCVENYVTAHYQSPRQMLCLWDKLQKEGKPQCCNMR* 655
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte3g00276 654 FunFam Hydroxyproline O-galactosyltransferase 399 642 - -
Pte3g00276 654 Pfam Galactoside-binding lectin 173 372 IPR001079 GO:0030246
Pte3g00276 654 CDD GLECT 176 373 IPR001079 GO:0030246
Pte3g00276 654 SMART Gal_bind_lectin_2 176 374 IPR001079 GO:0030246
Pte3g00276 654 Gene3D - 168 373 - -
Pte3g00276 654 Gene3D - 404 651 - -
Pte3g00276 654 PANTHER BETA-1,3-N-ACETYLGLUCOSAMINYLTRANSFERASE 342 603 IPR002659 GO:0006486|GO:0016020|GO:0016758
Pte3g00276 654 FunFam Hydroxyproline O-galactosyltransferase GALT2 289 373 - -
Pte3g00276 654 ProSiteProfiles Galactoside-binding lectin (galectin) domain profile. 172 375 IPR001079 GO:0030246
Pte3g00276 654 SUPERFAMILY Concanavalin A-like lectins/glucanases 174 373 IPR013320 -
Pte3g00276 654 Pfam Galactosyltransferase 421 601 IPR002659 GO:0006486|GO:0016020|GO:0016758
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte3g00276 Pte-Chr3 2332074 2336319 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte3g00276 5 655 Glycosyltransferase AT1G74800 64.211 0.0 903
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte3g00276 K20843 - qsa:O6P43_022779 1031.94
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte3g00276 3 2332074 2336319 Pte3g00276 3 2332074 2336319 RCT